Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I16
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.95 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   6.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 571 TSLGLANKGVTTYFSSNCTEQDSNLVND 654
           T++GL    +  +FS  C+ Q  +L+ND
Sbjct: 336 TAMGLYVLNMEHFFSVKCSIQSESLLND 363


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -3

Query: 154 NYPTPRIFGYLAVKNLTCLPXXXXXXFVYNILLIFNGK 41
           NYP     G+ ++   T L         + I++ FN K
Sbjct: 309 NYPDFSAAGFFSINKTTLLQIIGNVTTFFIIIIQFNNK 346


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -3

Query: 214 PDSNN--EHIIXHSLLDYQKPANYPTP 140
           PD  N   H I  SL++  KP   P P
Sbjct: 309 PDHMNTTNHAIVQSLVNSMKPKEVPGP 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,357
Number of Sequences: 336
Number of extensions: 3526
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)