Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I12
         (302 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   5.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   6.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     19   8.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    19   8.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    19   8.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           19   8.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    19   8.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 17  SMDLNASNFFEIFFPIFIVNNLRNNTELLSFIVRFS*LKRKHVYRLCLLKYFTRRKVMVX 196
           S   NAS    +FF +F  N L    E++S + +    K KH   + + K + R ++ + 
Sbjct: 83  SASANASGVATVFFCLFYQNKL---IEVISKLHKLD-NKLKH---MLIWKSYKRTQIFI- 134

Query: 197 TC 202
           TC
Sbjct: 135 TC 136


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 102 CPLSYVFLN*NVNMSIGCAY 161
           CP   VF   N  ++ GC Y
Sbjct: 58  CPNGLVFAGKNRGVTEGCDY 77


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 271 FGNSYYPQL 245
           +GN Y+PQL
Sbjct: 81  YGNYYHPQL 89


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 271 FGNSYYPQL 245
           +GN Y+PQL
Sbjct: 81  YGNYYHPQL 89


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 62  IFIVNNLRNNTELLSFIVRFS*LKRKHVYRL 154
           IF+V  + N+T LL+   R     RK + R+
Sbjct: 45  IFLVTVIGNSTVLLALWTRRRYAGRKKLSRM 75


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 271 FGNSYYPQL 245
           +GN Y+PQL
Sbjct: 81  YGNYYHPQL 89


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 271 FGNSYYPQL 245
           +GN Y+PQL
Sbjct: 81  YGNYYHPQL 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,378
Number of Sequences: 336
Number of extensions: 1100
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)