Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I12
         (302 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0022 - 135655-135717,137426-137482,137559-137678,137762-13...    39   9e-04
03_02_0318 + 7417361-7417519,7417638-7417690,7417770-7417836,741...    38   0.001
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660     26   6.5  

>02_01_0022 -
           135655-135717,137426-137482,137559-137678,137762-137920
          Length = 132

 Score = 38.7 bits (86), Expect = 9e-04
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +1

Query: 154 VPIKVLHEAEGHGXDLLKQIPVXFIQGKLIEAEDNMNCQM 273
           +P+K+LHEA GH   +  +    + +G ++E EDN NCQ+
Sbjct: 7   IPVKLLHEAAGHVVTVELKTGEVY-RGSMVECEDNWNCQL 45


>03_02_0318 +
           7417361-7417519,7417638-7417690,7417770-7417836,
           7417925-7417981,7420005-7420067
          Length = 132

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +1

Query: 154 VPIKVLHEAEGHGXDLLKQIPVXFIQGKLIEAEDNMNCQM 273
           +P+K+LHEA GH   +  +    + +G ++E EDN NCQ+
Sbjct: 7   IPVKLLHEAAGHVVTVELKTGEVY-RGAMVECEDNWNCQL 45


>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
          Length = 1369

 Score = 25.8 bits (54), Expect = 6.5
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = -2

Query: 76   IYDKNGKEYFKKIRRVQIHRHLNV 5
            ++ + G +YF K++++++HR  +V
Sbjct: 1176 VHFEGGMQYFTKLKKLEVHRCFDV 1199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,437,455
Number of Sequences: 37544
Number of extensions: 97382
Number of successful extensions: 143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)