Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I12
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-26|CAB55132.1| 136|Caenorhabditis elegans Hypothetical... 50 3e-07
U23937-1|AAA65451.1| 71|Caenorhabditis elegans small nuclear r... 31 0.16
CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical ... 28 1.5
AC006632-2|AAK85468.1| 478|Caenorhabditis elegans Hypothetical ... 28 1.5
Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 2.0
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 26 6.0
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 26 6.0
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 25 7.9
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 25 7.9
>AL117204-26|CAB55132.1| 136|Caenorhabditis elegans Hypothetical
protein Y116A8C.42 protein.
Length = 136
Score = 50.0 bits (114), Expect = 3e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +1
Query: 154 VPIKVLHEAEGHGXDLLKQIPVXFIQGKLIEAEDNMNCQM 273
VPIK+LHEAEGH L + + +GKL EAEDNMNCQ+
Sbjct: 6 VPIKILHEAEGHMVTL-ETVTGEVYRGKLSEAEDNMNCQL 44
>U23937-1|AAA65451.1| 71|Caenorhabditis elegans small nuclear
ribonucleoprotein protein.
Length = 71
Score = 31.1 bits (67), Expect = 0.16
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 229 QGKLIEAEDNMNCQM 273
+GKL EAEDNMNCQ+
Sbjct: 16 RGKLSEAEDNMNCQL 30
>CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical
protein C50E10.5 protein.
Length = 361
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 20 MDLNASNF-FEIFFPIFIVNNLRNNTELLSFIV 115
M N +NF +EI+ P++I+N+ N+ F++
Sbjct: 1 MIFNVNNFEYEIWIPVYILNDANYNSNFYRFLL 33
>AC006632-2|AAK85468.1| 478|Caenorhabditis elegans Hypothetical
protein F28A10.2 protein.
Length = 478
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 111 IKDNNSVLFLRLFTIKMGKNISKKLDAFK 25
+ DN+ V FL I+MG +IS +L AF+
Sbjct: 271 VLDNSFVFFLADHGIRMGSHISSELGAFE 299
>Z68114-4|CAA92159.1| 324|Caenorhabditis elegans Hypothetical
protein F17A2.6 protein.
Length = 324
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 41 FFEIFFPIFIVNNLRNNTELLSFIVRFS*LKRKHVYRLCLLKYFTRRKVMVXTC 202
F E+F+P F++ +L + ++ FI+ ++ K+ R L+ + + V C
Sbjct: 10 FLEVFYPFFLITSLISQLFVIYFILNYT-PKQLQTLRYILVNTCVFQVIHVSAC 62
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 35 SNFFEIFFPIFIVNNLRNNTELLSFIVRFS 124
S F+ FP+FIV+N+ NN+ + F + S
Sbjct: 47 SFIFQCPFPLFIVSNISNNSSIGHFKFQMS 76
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 35 SNFFEIFFPIFIVNNLRNNTELLSFIVRFS 124
S F+ FP+FIV+N+ NN+ + F + S
Sbjct: 47 SFIFQCPFPLFIVSNISNNSSIGHFKFQMS 76
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 100 IVLYRTFFLTKT*TCLSAVPIKVLHEAEGHGXDLLKQIPVXFIQGKLIEAEDN 258
IVL+ + F KT C VP+ ++ G + + F GK I A+ N
Sbjct: 97 IVLHGSDFWAKTLDCYIEVPLAAMYFGNIQGYTYISHWQISF-SGKKISADAN 148
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 100 IVLYRTFFLTKT*TCLSAVPIKVLHEAEGHGXDLLKQIPVXFIQGKLIEAEDN 258
IVL+ + F KT C VP+ ++ G + + F GK I A+ N
Sbjct: 97 IVLHGSDFWAKTLDCYIEVPLAAMYFGNIQGYTYISHWQISF-SGKKISADAN 148
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 87 IILNYCPLSYVFLN*NVNMSIGCAY*STSRGGRSW 191
+ +N CP L+ + N + C + S S G W
Sbjct: 634 VYVNVCPTGSPMLDASTNKPVPCTFGSNSCGADHW 668
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 87 IILNYCPLSYVFLN*NVNMSIGCAY*STSRGGRSW 191
+ +N CP L+ + N + C + S S G W
Sbjct: 1052 VYVNVCPTGSPMLDASTNKPVPCTFGSNSCGADHW 1086
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,067,335
Number of Sequences: 27780
Number of extensions: 100441
Number of successful extensions: 161
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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