Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I10
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.41 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.41 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.9  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 490 LLXNAFEEQIAFQKALKEYVSSIDPTYAKIQEEFFV 597
           LL N  E Q    K ++  +    PTYAK+QE  F+
Sbjct: 313 LLANHREVQEEILKEMEAVLDEEPPTYAKLQELKFM 348


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 490 LLXNAFEEQIAFQKALKEYVSSIDPTYAKIQEEFFV 597
           LL N  E Q    K ++  +    PTYAK+QE  F+
Sbjct: 313 LLANHREVQEEILKEMEAVLDEEPPTYAKLQELKFM 348


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 394  MEKVKQMIEDKSKRLLVSINDLRRKSPERAKNLLXNAFEEQIAFQKALKEYVSSID-PTY 570
            +E+    IED  K++   + DLR K       L+ N+    + F   LK+ +  +D P  
Sbjct: 1200 IEQYLHPIEDDKKKVSAELKDLRDKMV--FTFLMLNSLYVIVIFLLTLKKDLLHLDWPFD 1257

Query: 571  AKIQEEFF 594
             K+   +F
Sbjct: 1258 PKVNFTYF 1265


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 394  MEKVKQMIEDKSKRLLVSINDLRRKSPERAKNLLXNAFEEQIAFQKALKEYVSSID-PTY 570
            +E+    IED  K++   + DLR K       L+ N+    + F   LK+ +  +D P  
Sbjct: 1200 IEQYLHPIEDDKKKVSAELKDLRDKMV--FTFLMLNSLYVIVIFLLTLKKDLLHLDWPFD 1257

Query: 571  AKIQEEFF 594
             K+   +F
Sbjct: 1258 PKVNFTYF 1265


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +1

Query: 256 LKQLKQNITIFKAKFNMEEGDFDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKR 435
           L++  + + I KAK N  +  ++   + L R+Y +      +Q     + K   ED+++R
Sbjct: 171 LEKTSEELKIPKAKINTGKTQYNLNSKSLPRQYSQ-SRGRHNQSRSKRQPKTGREDQTRR 229

Query: 436 LLVSINDLRRKSPERAKN 489
                    R  P R K+
Sbjct: 230 NPYYRPRTSRTEPPRRKH 247


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 359 NFLTMVKIKKFI 394
           NFLT+ KIKK I
Sbjct: 227 NFLTVSKIKKHI 238


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 381 SRNLYGKSETDDRR*IKAPLSQHQ 452
           S  LY   +  DR   +APL+ HQ
Sbjct: 143 SHTLYHLQDIIDRNGGRAPLTYHQ 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,053
Number of Sequences: 336
Number of extensions: 2617
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)