Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I10
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 70 3e-13
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 32 0.083
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.59
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 29 0.77
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 28 1.4
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 2.4
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 27 2.4
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 26 4.1
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.5
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 26 5.5
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 26 5.5
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 26 5.5
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 25 7.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 25 7.2
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 25 7.2
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 25 9.5
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 25 9.5
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 25 9.5
SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 9.5
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 69.7 bits (163), Expect = 3e-13
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +1
Query: 319 FDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLRRKSPERAKNLLX 498
F R+R Q EYLE D + +Y E + +M+ +RL+V+I++LR + E A +L
Sbjct: 10 FKDRVRIFQ-EYLEHDTDDANVTLYQEAILRMLNMGQRRLIVNIDELRDYNRELADGVLL 68
Query: 499 NAFEEQIAFQKALKEYVSS-IDPTYAKIQEE--FFVAFSGSFGNKHVTPRSL 645
E F +AL+ VS+ IDP K ++ F+V F GSFG+ HV PR+L
Sbjct: 69 KPLEYVEPFDEALRNVVSTLIDPVVHKDLKDKLFYVGFRGSFGDHHVNPRTL 120
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 31.9 bits (69), Expect = 0.083
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 295 KFNMEEGDFDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLRRKSP 474
K EE ++ LR+ + +Y E L++ ED+ + +++++ + RLL +KS
Sbjct: 159 KAKKEESKLEEDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVVRLLQMQIRFHQKSL 218
Query: 475 ERAKNLLXNAFEEQ 516
+ K L N F ++
Sbjct: 219 DLLKGLEMNGFSKK 232
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 29.1 bits (62), Expect = 0.59
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 316 DFDQRLRDLQREYL-EFLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLRRK--SPERAK 486
D ++R ++ + +D ED+E +K ++ED KR V +D R+ S E
Sbjct: 1887 DLEKRTESANDDFFGNYTEDDEDRENARHLLKFLLEDSKKRFWVKTSDADREHGSEEGNT 1946
Query: 487 NLLXN 501
N + N
Sbjct: 1947 NSISN 1951
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.7 bits (61), Expect = 0.77
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 316 DFDQRLRDLQREYLEFLDDGEDQEIYMEKVK 408
D D++L LQ EY + + E+ M++VK
Sbjct: 3354 DLDEKLLQLQEEYASMISEIHSMELQMDEVK 3384
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 304 MEEGDFDQRLRD---LQREYLEFLDDGEDQEIY 393
MEEG+F + D L+R+Y E D D E+Y
Sbjct: 417 MEEGEFSEAREDLAALERDYEEVGQDSMDNEMY 449
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 259 KQLKQNITIFKAKFNMEEGDFDQRLR 336
KQL+ +IT K + NME D D+R R
Sbjct: 1066 KQLENSITKDKEELNMEFKDADERFR 1091
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 373 GEDQEIYMEKVKQMIEDKSKRLLVSINDLRRKSPERAKNLLXNAFEEQIAFQKALKEYVS 552
GE+ I K++ +D ++L + DLR + + NL A Q+ K Y+
Sbjct: 971 GEEVRIIASKIEST-DDNLRKLQERLADLRTRERNASDNLRLRALMRQLEEAVTQKNYLL 1029
Query: 553 S 555
S
Sbjct: 1030 S 1030
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 385 EIYMEKVKQMIEDKSKRLLVSINDLR 462
EIYMEK+ ++ +K+ RL V + L+
Sbjct: 135 EIYMEKIHDLLSEKNDRLTVHEDKLQ 160
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 4.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 307 EEGDFDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLR-RKSPERA 483
E + D+RLR L+ + E +I +EK+ K+KRL +ND + S R
Sbjct: 429 ERAEADERLR-LENFSTWVNEKRETHKILLEKIS-----KNKRLKFELNDRKSHASQMRM 482
Query: 484 KNLLXNAFEEQIAFQK 531
K+L A E+ I +K
Sbjct: 483 KSLATLASEQPIQKRK 498
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 286 FKAKFNMEEGDFDQRLRDLQREY 354
F K +MEEGDFD+ +++ Y
Sbjct: 162 FNLKEDMEEGDFDENGNFIRKNY 184
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 5.5
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 340 LQREYLEFLDDGEDQEIYMEKVKQ-MIEDKSKRLLVSINDLRRKSPERAKNLLXNAFEEQ 516
+Q+ + EF+ + E E Y+ KVK +E S RLL I+ L + A E+
Sbjct: 280 VQQFFQEFIKENEPLEPYVVKVKNAFVEQVSIRLLELIDLL--DANRILSTACKKAANEK 337
Query: 517 IAFQKALKE 543
+A Q+ L +
Sbjct: 338 LAVQRDLSK 346
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 641 LRGVTCLLPKLPENATKNSS*ILAYVGSIEDTYSFKAF 528
+RG+T L P ++ NS ++ Y G DT +F +
Sbjct: 22 VRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEY 59
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 370 DGEDQEIYMEKVKQMIEDKSKRLLV 444
DG + ++ VK+ IED +K LLV
Sbjct: 428 DGREAVTFLRLVKEYIEDPAKMLLV 452
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 451 NDLRRKSPERAKNLLXNAFEEQIAFQKALKEY-VSSIDPTY 570
N+L KS ER +NL+ + F + Q +L++Y + DP Y
Sbjct: 383 NELISKSAERKENLMQSVFNS--SKQISLRKYELEPYDPIY 421
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 25.4 bits (53), Expect = 7.2
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +1
Query: 259 KQLKQNITIFKAKFNMEEGDFDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKRL 438
K++ + ++ N E DFD+ R Q+ EFLD E+ Y ++ + K+ +
Sbjct: 501 KEIFNDESVVLFLLNPELDDFDETKRTAQKIATEFLD--EEGRTYQSNWQKETDKKNSLV 558
Query: 439 LVSINDLRRKSPERAKNLLXN 501
+ ++ E AKN N
Sbjct: 559 NEAEEKNDLEAIEAAKNFHVN 579
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 481 HVQDFYALSH*C*LRGALIYLL 416
H D +A++H C +R +L YLL
Sbjct: 941 HCGDLFAINHVCFVRNSLKYLL 962
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 334 RDLQREYLE-FLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLRRKSPERAKNL 492
RD RE LE F G++ I +++++ + K+ L S++D+R + +NL
Sbjct: 1421 RDSLREDLEKFRSTGKNSSILEAQLREITKQKNM-LEQSLDDMRERQRSTNRNL 1473
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 289 KAKFNMEEGDFDQRLRDLQREYLEFLDDGEDQEIYM 396
K+KF++ E + +L + +++LDD ED+++Y+
Sbjct: 432 KSKFDIAEVERMCKLYSNFKLLMDWLDDIEDEDVYI 467
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 307 EEGDFDQRLRDLQREYLEFLDDGEDQEIYMEKVKQMIEDKSKRLLVSINDLRRKSPERAK 486
E G+ ++ + D +Y L D E ++ + K ++LL SI D+R + PE K
Sbjct: 109 EIGELEEHMVDRYDQYRVSLKTIRDIEASVQPTRV----KKEKLLNSIYDVRSRDPESPK 164
>SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 579 NFSICRVYRRHIFF*SLLECYLFFKGI 499
+ S C V+ H + S+LE Y FF+G+
Sbjct: 167 DLSFCTVF--HGYLTSILEAYEFFRGV 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,261,227
Number of Sequences: 5004
Number of extensions: 42424
Number of successful extensions: 155
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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