Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I09
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.54 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.54 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.54 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 560 LLNNRPTNWLVMKQIL*SYVEWMEHVMHRHSYL 462
           L+ N PT +L+   ++   V W E+ +   SYL
Sbjct: 3   LVENNPTLYLIPVSVILISVGWWENFVSETSYL 35


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 560 LLNNRPTNWLVMKQIL*SYVEWMEHVMHRHSYL 462
           L+ N PT +L+   ++   V W E+ +   SYL
Sbjct: 236 LVENNPTLYLIPVSVILISVGWWENFVSETSYL 268


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 560 LLNNRPTNWLVMKQIL*SYVEWMEHVMHRHSYL 462
           L+ N PT +L+   ++   V W E+ +   SYL
Sbjct: 236 LVENNPTLYLIPVSVILISVGWWENFVSETSYL 268


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 359 VQXFVVTTKLGTIAPKIPLKSYGILVTLFFISSVANNYVYAL 484
           +  F+V  ++    PK+ LK Y ++      +SVA   +Y +
Sbjct: 334 IDIFLVAIQMNP--PKVSLKGYTVVNRELVTASVATIAIYLI 373


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 359 VQXFVVTTKLGTIAPKIPLKSYGILVTLFFISSVANNYVYAL 484
           +  F+V  ++    PK+ LK Y ++      +SVA   +Y +
Sbjct: 334 IDIFLVAIQMNP--PKVSLKGYTVVNRELVTASVATIAIYLI 373


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 32  VLFLCNLITLN*MYYLWIQFTQLPIYFTI 118
           +LF C LI L  +YY +  F    ++  +
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLL 254


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 359 VQXFVVTTKLGTIAPKIPLKSYGILVTLFFISSVANNYVYAL 484
           +  F+V  ++    PK+ LK Y ++      +SVA   +Y +
Sbjct: 334 IDIFLVAIQMNP--PKVSLKGYTVVNRELVTASVATIAIYLI 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,031
Number of Sequences: 336
Number of extensions: 3246
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)