Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I09
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1039 - 34011133-34012218                                         31   0.80 
05_05_0331 + 24142484-24143548                                         29   2.4  
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067           29   3.2  
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282...    29   3.2  
06_03_1290 - 29023265-29023469,29023762-29023983,29024097-29025262     28   5.6  
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218...    28   7.5  

>01_06_1039 - 34011133-34012218
          Length = 361

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 21/83 (25%), Positives = 42/83 (50%)
 Frame = +2

Query: 395 IAPKIPLKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKP 574
           + P++   S   +  L+ +S   +N  Y +++  +   ++++    A   +  L KK+  
Sbjct: 93  MTPQLYTSSVLPIGALYSLSLWFSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLFKKENF 151

Query: 575 KLNXTVXSILISFGVALAMYGGA 643
           K +  +  + ISFGVA+A YG A
Sbjct: 152 KSSAMLNMLSISFGVAIAAYGEA 174


>05_05_0331 + 24142484-24143548
          Length = 354

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/83 (24%), Positives = 42/83 (50%)
 Frame = +2

Query: 395 IAPKIPLKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKP 574
           + P++   S   +  L+ +S   +N  Y +++  +   ++++    A   +  L KK+  
Sbjct: 86  MTPQLYTSSVVPIGALYAMSLWFSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLFKKETF 144

Query: 575 KLNXTVXSILISFGVALAMYGGA 643
           + +  +  + ISFGVA+A YG A
Sbjct: 145 RSSSMLNMLSISFGVAIAAYGEA 167


>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
          Length = 472

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +2

Query: 497 TLHMIIRSASSPASLLVYCLIKKQKPKLNXTVXSILISFG 616
           T  M  +S S+  SLL+ C +KK +PKL  T+   L+  G
Sbjct: 248 TTSMYYKSLSTLQSLLLVC-VKKLQPKLVVTIEEDLVRIG 286


>10_08_0838 - 20927020-20927207,20927288-20927491,20927654-20928297,
            20928549-20928788,20928884-20928978,20929087-20929434,
            20929824-20930042,20930422-20930487,20931191-20931362,
            20931456-20931703,20931933-20932073,20932238-20932330,
            20932421-20932471,20933571-20933693,20933793-20934035,
            20934131-20934211,20935245-20935340,20935535-20936320,
            20936443-20937012,20937322-20937427,20938102-20938206,
            20938311-20938432,20939321-20939413,20940081-20940104
          Length = 1685

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/53 (22%), Positives = 29/53 (54%)
 Frame = +1

Query: 223  QNEFNQKVCTRIRRLLLECFLNGNSHDKNARVRYFYYISSIFIHNCSXFCGNN 381
            + ++ + +CT ++RL+L+   +G++   N  V+Y  Y+  +     S   G++
Sbjct: 1366 EEKYPKHICTILKRLILQVLSSGSNSQDNKVVQYGNYLLLLVASEVSLQSGDH 1418


>06_03_1290 - 29023265-29023469,29023762-29023983,29024097-29025262
          Length = 530

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 404 KIPLKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVY 550
           K PLK  GI + LF  S   +++     VP+  +M I S  +P  LL++
Sbjct: 218 KAPLKKKGINIALFSFSVTVSSFANVGLVPTNENMAIFS-KNPGLLLLF 265


>03_06_0003 +
           30921197-30921388,30921514-30921632,30921742-30921811,
           30922078-30922161,30922258-30922344,30922431-30922501,
           30922648-30922702,30923374-30923509,30925009-30925103,
           30925203-30925357,30925435-30925543,30925761-30925817,
           30925913-30926027,30926177-30926264,30926738-30927501,
           30927600-30927688,30928315-30928422,30928550-30928657,
           30928887-30928977,30929235-30929287,30929557-30929712,
           30930763-30930825,30931491-30931535,30932075-30932130,
           30933051-30933132,30933238-30933354,30933428-30933530,
           30933912-30934062,30934180-30934417,30934564-30934764,
           30934850-30934935,30935036-30935135
          Length = 1347

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 277 CFLNGNSHDKNARVRYFYYISS 342
           C+L+ NSHD NA +    Y S+
Sbjct: 288 CYLSANSHDSNAAINQVRYSST 309


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,913,529
Number of Sequences: 37544
Number of extensions: 269873
Number of successful extensions: 464
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)