Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I09
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.8  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   8.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   8.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 452  SSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKK 565
            S   NN+ + LH    L +    ASS A++  Y +  K
Sbjct: 3280 SQSLNNFKFGLHTQEILPLQFNKASSMATINEYRVCSK 3317


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 376 NNKIRNNCAKNTFKKLWNFGYTIFHIKCS 462
           NNK   +CA+N    L +FG   F   CS
Sbjct: 28  NNKTNCHCARNLSHSLLSFG--PFGFSCS 54


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 309 IFVMRISIKKALEQQPTNTCTNFLIE 232
           + +M I++     Q+P +TC  F+ E
Sbjct: 600 VLIMFINMMLFKNQEPLDTCKEFMFE 625


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,052
Number of Sequences: 2352
Number of extensions: 13161
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)