Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I09
         (653 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g17430.1 68416.m02226 phosphate translocator-related low simi...    31   0.51 
At2g25520.1 68415.m03055 phosphate translocator-related low simi...    31   0.67 
At5g11230.1 68418.m01312 phosphate translocator-related low simi...    31   0.88 
At4g32390.1 68417.m04612 phosphate translocator-related low simi...    31   0.88 
At5g25400.1 68418.m03013 phosphate translocator-related low siim...    30   1.2  

>At3g17430.1 68416.m02226 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           SP|P52178 Triose phosphate/phosphate translocator,
           non-green plastid, chloroplast precursor (CTPT)
           {Brassica oleracea}
          Length = 375

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 20/94 (21%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = +2

Query: 368 FVVTTKLGTIAP-KIPLKSYG---ILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPA 535
           F++      +AP K+  + Y    + ++ FF SS+       LH+      ++++    A
Sbjct: 60  FLLIRVFKVVAPVKMTFEIYATCVVPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVA 119

Query: 536 SLLVYCLIKKQKPKLNXTVXSILISFGVALAMYG 637
           + ++  +    KP+ +     +L+S GV ++ YG
Sbjct: 120 TFIMAVVCGTDKPRCDVFSNMLLVSVGVVISSYG 153


>At2g25520.1 68415.m03055 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 347

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +2

Query: 413 LKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKPKLNXTV 592
           L+S   +  L+ +S   +N  Y +++  +   ++++    A   +  L+KK+  K     
Sbjct: 86  LRSVVPIGALYSLSLWLSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMT 144

Query: 593 XSILISFGVALAMYGGA 643
             + ISFGVA+A YG A
Sbjct: 145 NMLSISFGVAIAAYGEA 161


>At5g11230.1 68418.m01312 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           SP|P52178 Triose phosphate/phosphate translocator,
           non-green plastid, chloroplast precursor (CTPT)
           {Brassica oleracea}
          Length = 351

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = +2

Query: 413 LKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKPKLNXTV 592
           L+S   +  L+ +S   +N  Y +++  +   ++++    A   +  L KK+  K +  +
Sbjct: 86  LRSVVPIGALYALSLWLSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMM 144

Query: 593 XSILISFGVALAMYGGA 643
             + ISFGVA+A YG A
Sbjct: 145 NMLSISFGVAIAAYGEA 161


>At4g32390.1 68417.m04612 phosphate translocator-related low
           similarity to phosphoenolpyruvate/phosphate translocator
           precursor [Mesembryanthemum crystallinum] GI:9295275,
           SP|P52178 Triose phosphate/phosphate translocator,
           non-green plastid, chloroplast precursor (CTPT)
           {Brassica oleracea}
          Length = 350

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +2

Query: 440 LFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKPKLNXTVXSILISFGV 619
           L+ +S   +N  Y +++  +   ++++    A   +  L+KK+  K       + ISFGV
Sbjct: 95  LYSLSLWLSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLLKKESFKSETMTNMLSISFGV 153

Query: 620 ALAMYGGA 643
           A+A YG A
Sbjct: 154 AIAAYGEA 161


>At5g25400.1 68418.m03013 phosphate translocator-related low
           siimilarity to phosphoenolpyruvate/phosphate
           translocator precursor [Mesembryanthemum crystallinum]
           GI:9295275, SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea}
          Length = 349

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/77 (27%), Positives = 39/77 (50%)
 Frame = +2

Query: 413 LKSYGILVTLFFISSVANNYVYALHVPSTLHMIIRSASSPASLLVYCLIKKQKPKLNXTV 592
           L+S   +  L+ +S   +N  Y +++  +   ++++    A   +  L KK+  K    +
Sbjct: 86  LRSVVPIGALYSLSLWLSNSAY-IYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMM 144

Query: 593 XSILISFGVALAMYGGA 643
             + ISFGVA+A YG A
Sbjct: 145 NMLSISFGVAIAAYGEA 161


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,702,483
Number of Sequences: 28952
Number of extensions: 245017
Number of successful extensions: 515
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)