Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I08
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1015 + 23307700-23307906,23309274-23309483,23309915-233100...   196   2e-50
04_04_1339 + 32760424-32760584,32762428-32764462                       33   0.20 
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265...    28   7.5  
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397...    27   9.9  
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68...    27   9.9  
01_07_0231 + 42176598-42178117,42178232-42179753                       27   9.9  
01_05_0584 + 23435620-23436408,23436966-23437508                       27   9.9  

>07_03_1015 +
           23307700-23307906,23309274-23309483,23309915-23310085,
           23310163-23310286,23310753-23310814,23311185-23311266,
           23311870-23312009
          Length = 331

 Score =  196 bits (477), Expect = 2e-50
 Identities = 90/148 (60%), Positives = 113/148 (76%)
 Frame = +2

Query: 209 CSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASVI 388
           C G++ ++  TFH++QA++YGT +VGGV+PKK GTEHLG PVF +V EAKA T A ASVI
Sbjct: 47  CQGITGKN-GTFHTEQAIEYGTTMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVI 105

Query: 389 YVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSXLVGPNCPGIIAP 568
           YVPPP             + L+VCITEG+PQHDMV+VK AL +Q+K+ L+GPNCPGII P
Sbjct: 106 YVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKP 165

Query: 569 XKCKIGIMPAAVHKRGCIGVVSRSGTLT 652
            +CKIGIMP  +HK G +G+VSRSGTLT
Sbjct: 166 GECKIGIMPGYIHKPGRVGIVSRSGTLT 193


>04_04_1339 + 32760424-32760584,32762428-32764462
          Length = 731

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = +3

Query: 21  NLN*SLVFPFRRFTFNNSTMAMPVRVLSKFKDGLKLGNVRFASGNPYAETRKNL 182
           N +    F  RR   N ST  M V +L    DGL  G++  A+G P+A+ ++ L
Sbjct: 543 NADIKATFGGRRHELNVSTYQMCVLMLFNSADGLTYGDIEQATGIPHADLKRCL 596


>01_06_0529 -
           30026101-30026277,30026363-30026438,30026509-30026570,
           30026882-30027031,30027213-30027338,30028096-30028305,
           30028870-30028938,30029024-30029080,30029131-30029277,
           30029358-30029542,30029623-30029698,30029796-30029918,
           30030395-30030410,30031743-30032745,30033521-30033789,
           30034297-30034415
          Length = 954

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 446 PLIVCITEGVPQHDMVRVKHALLR 517
           PL+ CIT  VPQ  +  ++HA+ +
Sbjct: 757 PLVACITRLVPQKGLHLIRHAIYK 780


>09_02_0077 +
           3964729-3964734,3965194-3965289,3965744-3973579,
           3973665-3973982,3974565-3974763,3974937-3975202,
           3975288-3975574,3976714-3977818,3977900-3978046,
           3978146-3978226,3978315-3978540,3978622-3978761,
           3979539-3979645,3979739-3979841
          Length = 3638

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = +2

Query: 197 NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTGAT 376
           +K  C G S     + +S   L   T V GG S  + GT  +G     + K   A   AT
Sbjct: 600 SKVGCGGESSSCTESGNSSTPLPMETDVQGGTSRSEVGTSEVG----SSEKMVDASLDAT 655

Query: 377 ASVI--YVP 397
           +S I  Y+P
Sbjct: 656 SSSIESYLP 664


>02_01_0095 -
           679597-679671,679775-679890,682241-682319,682446-682539,
           682638-682716,682846-682933,683023-683106,683351-683398,
           684044-684118,684274-684315,684347-684416,684551-684589,
           685118-685191,686936-687028,687203-687300,688170-688236
          Length = 406

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 263 DYGTKVVGGVSPK--KAGTEHLGKPVF 337
           DY T+ VGG  P+  KA TE L K  F
Sbjct: 16  DYSTRYVGGSEPRLVKAATEQLNKLPF 42


>01_07_0231 + 42176598-42178117,42178232-42179753
          Length = 1013

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 281 VGGVSPKKAGTEHLGKPVFGTVKEAKAGTGATASV 385
           VGG     +    +G+ VFGTV  A  G G   ++
Sbjct: 713 VGGADALLSKATEIGRGVFGTVYRASVGEGRVVAI 747


>01_05_0584 + 23435620-23436408,23436966-23437508
          Length = 443

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 633 DTTPMQPRLCTAAGMIPILHXSGAMIPGQLGPTSXDLFCLKRACFTRTISCCGTPSVM 460
           D +P+   L        +LH     +  QL PTS   FC+  A F R  SC    +V+
Sbjct: 4   DKSPIDEALLHGKHEEALLHGKHEHVEQQLLPTSGGSFCITGASFGR--SCLNLSNVI 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,920
Number of Sequences: 37544
Number of extensions: 344997
Number of successful extensions: 906
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)