SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I08
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.              209   6e-54
BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.      209   6e-54
AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.             209   6e-54
AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase...   208   1e-53
Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A synth...   109   8e-24
BC104184-1|AAI04185.1|  199|Homo sapiens KIAA1644 protein protein.     30   8.3  
BC104183-1|AAI04184.1|  199|Homo sapiens KIAA1644 protein protein.     30   8.3  
AL591914-1|CAM28349.1|  199|Homo sapiens protein ( Human DNA seq...    30   8.3  
AL022339-1|CAI41964.2|  199|Homo sapiens protein ( Human DNA seq...    30   8.3  

>CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.
          Length = 333

 Score =  209 bits (511), Expect = 6e-54
 Identities = 98/154 (63%), Positives = 113/154 (73%)
 Frame = +2

Query: 191 K*NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG 370
           K  K  C G +   + TFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TG
Sbjct: 41  KNTKIICQGFT-GKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTG 99

Query: 371 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSXLVGPNC 550
           ATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+ L+GPNC
Sbjct: 100 ATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159

Query: 551 PGIIAPXKCKIGIMPAAVHKRGCIGVVSRSGTLT 652
           PG+I P +CKIGIMP  +HK+G IG+VSRSGTLT
Sbjct: 160 PGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLT 193


>BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.
          Length = 333

 Score =  209 bits (511), Expect = 6e-54
 Identities = 98/154 (63%), Positives = 113/154 (73%)
 Frame = +2

Query: 191 K*NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG 370
           K  K  C G +   + TFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TG
Sbjct: 41  KNTKIICQGFT-GKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTG 99

Query: 371 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSXLVGPNC 550
           ATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+ L+GPNC
Sbjct: 100 ATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159

Query: 551 PGIIAPXKCKIGIMPAAVHKRGCIGVVSRSGTLT 652
           PG+I P +CKIGIMP  +HK+G IG+VSRSGTLT
Sbjct: 160 PGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLT 193


>AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.
          Length = 333

 Score =  209 bits (511), Expect = 6e-54
 Identities = 98/154 (63%), Positives = 113/154 (73%)
 Frame = +2

Query: 191 K*NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG 370
           K  K  C G +   + TFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TG
Sbjct: 41  KNTKIICQGFT-GKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTG 99

Query: 371 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSXLVGPNC 550
           ATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+ L+GPNC
Sbjct: 100 ATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159

Query: 551 PGIIAPXKCKIGIMPAAVHKRGCIGVVSRSGTLT 652
           PG+I P +CKIGIMP  +HK+G IG+VSRSGTLT
Sbjct: 160 PGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLT 193


>AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase
           alpha subunit protein.
          Length = 333

 Score =  208 bits (508), Expect = 1e-53
 Identities = 98/154 (63%), Positives = 112/154 (72%)
 Frame = +2

Query: 191 K*NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG 370
           K  K  C G +   + TFHSQQAL+YGTK+VGG  P K G  HLG PVF TVKEAK  TG
Sbjct: 41  KNTKIICQGFT-GKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFNTVKEAKEQTG 99

Query: 371 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITEGVPQHDMVRVKHALLRQNKSXLVGPNC 550
           ATASVIYVPPP             +PL+VCITEG+PQ DMVRVKH LLRQ K+ L+GPNC
Sbjct: 100 ATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 159

Query: 551 PGIIAPXKCKIGIMPAAVHKRGCIGVVSRSGTLT 652
           PG+I P +CKIGIMP  +HK+G IG+VSRSGTLT
Sbjct: 160 PGVINPGECKIGIMPGHIHKKGRIGIVSRSGTLT 193


>Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A
           synthetase protein.
          Length = 132

 Score =  109 bits (262), Expect = 8e-24
 Identities = 54/93 (58%), Positives = 61/93 (65%)
 Frame = +2

Query: 191 K*NKSDCSGLSLESRATFHSQQALDYGTKVVGGVSPKKAGTEHLGKPVFGTVKEAKAGTG 370
           K  K  C G +   + TFHSQQAL+YGTK+VGG +P K G  HLG PVF TVKEAK  TG
Sbjct: 41  KNTKIICQGFT-GKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEAKEQTG 99

Query: 371 ATASVIYVPPPGXXXXXXXXXXXXMPLIVCITE 469
           ATASVIYVPPP             +PL+VCITE
Sbjct: 100 ATASVIYVPPPFAAAAINEAIEAEIPLVVCITE 132


>BC104184-1|AAI04185.1|  199|Homo sapiens KIAA1644 protein protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 646 CPRTRYNSDATTFVHCSWHDTNFTLXGSNDTRTVRTNQXRLVLSQEGMFYSHHIML 479
           CPR    SD  TF+ C  H+        N+T      Q  L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>BC104183-1|AAI04184.1|  199|Homo sapiens KIAA1644 protein protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 646 CPRTRYNSDATTFVHCSWHDTNFTLXGSNDTRTVRTNQXRLVLSQEGMFYSHHIML 479
           CPR    SD  TF+ C  H+        N+T      Q  L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>AL591914-1|CAM28349.1|  199|Homo sapiens protein ( Human DNA
           sequence from clone CITF22-4H11 on chromosome 22. ).
          Length = 199

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 646 CPRTRYNSDATTFVHCSWHDTNFTLXGSNDTRTVRTNQXRLVLSQEGMFYSHHIML 479
           CPR    SD  TF+ C  H+        N+T      Q  L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


>AL022339-1|CAI41964.2|  199|Homo sapiens protein ( Human DNA
           sequence from clone LL22NC03-75B3 on chromosome 22. ).
          Length = 199

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 646 CPRTRYNSDATTFVHCSWHDTNFTLXGSNDTRTVRTNQXRLVLSQEGMFYSHHIML 479
           CPR    SD  TF+ C  H+        N+T      Q  L  S EG  ++++  L
Sbjct: 47  CPRL---SDNKTFILCCHHNNTVFKYCCNETEFQAVMQANLTASSEGYMHNNYTAL 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,693,381
Number of Sequences: 237096
Number of extensions: 1994499
Number of successful extensions: 3754
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3749
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -