Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I01
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    28   0.053
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 0.053
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +3

Query: 210 ESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSEG-GKKRVFNTKTLKDQ 386
           E E+ +  D  + +K ++  +D +KD   +E   +DE+     E   KK+    K  +D+
Sbjct: 218 EREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDE 277

Query: 387 --NGQYPVW 407
             N   P+W
Sbjct: 278 ELNKTKPIW 286


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 99  RKCRAIKRERYAVKELXRLKKMLGVKDEEKPAG 197
           RK   I  E     +L ++K ++ V+DE KP G
Sbjct: 150 RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 255 SKKVLQDIEKDNEXVEMSSDDENVVVDSE 341
           SKK  +D E ++   +   DDEN+ VD +
Sbjct: 21  SKK--EDEEVEHRLSDRDDDDENITVDDD 47


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 321 NVVVDSEGGKKRVFNT 368
           N+ V S+G  K  FNT
Sbjct: 434 NIEVQSQGSSKNTFNT 449


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 42  SKYFCF*NAMAKSIRSRWKR 101
           SKY  F N M      +W+R
Sbjct: 697 SKYLDFINVMTYDFHGQWER 716


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 423 SYVCATKPGTVRSD 382
           SY+C  KPG   S+
Sbjct: 44  SYICTCKPGFTGSN 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,359
Number of Sequences: 336
Number of extensions: 1957
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)