Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I01
(493 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.50
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 0.66
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 27 1.2
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 27 1.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.5
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 27 2.0
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 2.7
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 26 3.5
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 3.5
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 26 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.5
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.5
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 25 4.7
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 6.2
SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.2
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 25 8.2
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 25 8.2
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 8.2
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 28.7 bits (61), Expect = 0.50
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 258 KKVLQDI-EKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQY 398
K VL+D+ +KDNE SD+E+ V D E F+ K N +Y
Sbjct: 160 KGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRY 207
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 0.66
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +3
Query: 132 AVKELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSS 311
A KE+ RL ++ SE+ ++E+V + K + L D E ++E V +
Sbjct: 77 ATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKSTKSEE--LTDEESEDEEVYDPA 134
Query: 312 DDENVVVDSEGGKKRVFNTKT 374
E ++ SE + ++T
Sbjct: 135 RGEGIISTSESSDESDAESET 155
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 1.2
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 138 KELXRLKKMLGVKDEEKPAGSEV 206
+E+ L+KMLG+K ++K A S++
Sbjct: 115 REIAHLEKMLGIKSKDKSAHSKI 137
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.1 bits (57), Expect = 1.5
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 153 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVV 332
LK +G+K+ E S +SE ++F + D K L D+E + + S +V
Sbjct: 215 LKSYIGLKNMEYRVRSSFNQSETIVFSGSED---GKVYLWDLENETQITSTSVVGTPIVT 271
Query: 333 D 335
D
Sbjct: 272 D 272
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 241 PASRNITCSDSITSLPAGFSSSLTPSIF 158
P S + S SIT++ +G SSS PS F
Sbjct: 546 PTSSSSDFSSSITTISSGISSSSIPSTF 573
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.6 bits (56), Expect = 2.0
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 329 HN-VFII*THFDVFIILFDVL*YFF 258
HN F I TH FI+ F VL YF+
Sbjct: 205 HNETFNIWTHLSAFIVFFAVLAYFY 229
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 93 WKRKCRAIKRERYAVKELXRLKKMLGVKDEEKPAGSEVME 212
WK K IK E V+++ LKK ++ E P S + +
Sbjct: 211 WKNKVEQIKNESRLVRKIQELKK--SYQESEHPIVSSIRD 248
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 25.8 bits (54), Expect = 3.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 IFLDAGDLKKSKKVLQDIEKDNEXVEMSSD 314
IF + GDLKK + QD+ + V+ S+
Sbjct: 166 IFSETGDLKKGIAIFQDLSDAEQAVQYLSN 195
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 3.5
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 250 FKSPASRNITCSDS-ITSLPAGFSSSLTPSIFFNRXNSFTAYRS 122
F++P + I+ +S ++S P +SSLTP N ++A+RS
Sbjct: 174 FQTPRAAAISKRESGVSSEPRARTSSLTPGNTPNSAKQWSAFRS 217
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.8 bits (54), Expect = 3.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 387 SDLSKFSY*KLFSCRLHYRPQRFHHLNSFRRXHYPFRCLVILFCFSLNRPR 235
+DL +F+ K +LH+ P R H L F + +VI + + R R
Sbjct: 768 ADLLRFNALKARKKQLHFGPSRIHTLGLFAMENIDKNDMVIEYIGEIIRQR 818
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 3.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 244 SPASRNITCSDSITSLPAGFSSSLTPS 164
+PAS T + S++S + SSS TPS
Sbjct: 749 TPASSTSTTTSSVSSRQSSSSSSFTPS 775
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.8 bits (54), Expect = 3.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 4 LSRDYLQKRVAL--LQNIFVFKTQWRNRLGADGSENAGRSNENGMR*KNXRD 153
LS ++ +K+ L LQN + +T R +G+DGS + E M K+ +
Sbjct: 244 LSENFQRKQEILSGLQNNVILRTNNRKPVGSDGSNSNFNGGEEQMDSKDQEE 295
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 25.4 bits (53), Expect = 4.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 241 PASRNITCSDSITSLPAGFSSSLTP 167
P R+ + S+ +TS+ SSSL+P
Sbjct: 359 PTKRSFSMSEIVTSMQMSISSSLSP 383
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/28 (35%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 210 ESEQVIFLDAGDLKKS-KKVLQDIEKDN 290
E +++ DA ++K+ K+V++D+EK+N
Sbjct: 1600 EEHSIVYEDAKLMEKTLKEVIEDLEKNN 1627
>SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.0 bits (52), Expect = 6.2
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -3
Query: 347 AAFTIDHNVFII*THFDVFIILFDVL*YFFAFL 249
A F++DH +F++ + + +F+++ +F A L
Sbjct: 172 AHFSLDHWIFVVEYYAPIVFYVFNLMGFFLAAL 204
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 6.2
Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMS--SDDENVVVDSEG 344
K+EE+P SE +++ + D D ++ L + ++ ++++ S+D + + +EG
Sbjct: 503 KEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAIVAEG 561
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 98 LPSAPNRFRHCVLKTK 51
LPS PNR H VL K
Sbjct: 598 LPSRPNRMNHSVLNEK 613
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 24.6 bits (51), Expect = 8.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 87 SRWKRKCRAIKRERYAV 137
SRWK+K + +K E Y V
Sbjct: 119 SRWKKKIQLLKSEDYTV 135
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 24.6 bits (51), Expect = 8.2
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 184 RNQLEVRLWNLSKL 225
RNQ ++ +WNLSKL
Sbjct: 325 RNQPDIIIWNLSKL 338
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,735,811
Number of Sequences: 5004
Number of extensions: 33093
Number of successful extensions: 152
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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