Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I01
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0604 + 20920609-20922144 34 0.054
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 33 0.094
07_01_0463 + 3502708-3503535 32 0.22
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 31 0.38
06_02_0105 - 11893666-11895483,11895661-11896422 30 1.2
03_05_0999 - 29583959-29584711,29584797-29585021,29585163-295853... 30 1.2
01_01_0001 + 2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7... 29 1.5
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 29 2.7
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188... 29 2.7
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 28 3.5
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 28 4.7
07_03_1570 + 27797315-27797409,27797519-27797551,27798135-277981... 27 6.2
07_03_1228 - 25009736-25010965 27 6.2
04_04_1695 + 35433975-35437040 27 6.2
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 8.2
>12_02_0604 + 20920609-20922144
Length = 511
Score = 34.3 bits (75), Expect = 0.054
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 111 AIKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQV-IFLDAGDLKKSKKVLQDIEKD 287
A+K+ R + E+ RL LGV +EK A ++ ++E+ I + G+LK+ + +Q +
Sbjct: 307 AVKKHRASEAEVERLCAELGVLTKEKEAAAKAFDAEKAGIMREFGELKQKVEEIQASKGA 366
Query: 288 NEXVEMSSDDENVVVDSE 341
E D + V + +E
Sbjct: 367 AEEAGREKDAQAVKLRNE 384
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 33.5 bits (73), Expect = 0.094
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 234 DAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVD-SEGGKKRVFNTKTLKDQNGQ 395
D+G KK KK + + D + +E+ ++EN D ++G ++ V N + +++G+
Sbjct: 279 DSGKKKKKKKAARKMSSDEDDIEVEENEENTDNDGNDGNEEHVENEENEGNKSGE 333
>07_01_0463 + 3502708-3503535
Length = 275
Score = 32.3 bits (70), Expect = 0.22
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 159 KMLGVKDEEKPAGSEV---MESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEM-SSDDENV 326
K G +DE+K EV + ++ + LD+ D KS +D +KD E + DDE+
Sbjct: 37 KSSGDEDEKKEIEIEVKAKIVDKEEVKLDSDDGAKSAVKSKDSKKDKENKKSDKKDDEHD 96
Query: 327 VVDSEGGKKRVFNTKTLKDQN 389
D EG KK + KD++
Sbjct: 97 DEDEEGKKKEKEMKEKKKDKS 117
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 31.5 bits (68), Expect = 0.38
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 141 ELXRLKKMLGVKDEEKPAG-SEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDD 317
EL +LK+ L EE A S +++ +++ + LK+ + LQD + ++E ++ S +D
Sbjct: 967 ELFQLKEELEKYKEEAQANKSYMLQYKEIANSNESALKQMESALQDFKTESETIKKSLED 1026
Query: 318 E 320
E
Sbjct: 1027 E 1027
>06_02_0105 - 11893666-11895483,11895661-11896422
Length = 859
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +3
Query: 93 WKRKCRAIKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQ 272
WK + ++E V EL RLKK + E +E +E+ +V + + +K+K++++
Sbjct: 245 WKTRITEPEQENEIVLELDRLKKEI----SESKRQAEAVEAAKVPL--SNEYEKTKRLIE 298
Query: 273 DIEKDNEXVE 302
+E D E +
Sbjct: 299 GLEHDLEKAQ 308
>03_05_0999 -
29583959-29584711,29584797-29585021,29585163-29585360,
29585472-29586056
Length = 586
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 168 GVKDEEKPAGSEVMESEQ-VIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDE 320
G +D+ A +E E V D G +KKSK+ L+ E++ + V+ SD+E
Sbjct: 76 GGQDDAATASHHAVEGENGVADADGGGVKKSKEELE--EEEQQEVDWRSDEE 125
>01_01_0001 +
2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,
7232-7320,7408-7608,8210-8311,9104-9187,9232-9244,
9504-9562
Length = 616
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 72 AKSIRSRWKRKCRAIKRERY--AVKELXRLKKMLGVKDEEKPAGSEVME 212
A S S ++RK RA++RE+Y V++ + +G + GS++M+
Sbjct: 108 ALSSTSEYRRKLRAVRREKYQILVRQCQSMHPSIGTGELAYAVGSKLMD 156
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +3
Query: 111 AIKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDN 290
A +RER+ +++ + +K+E A +E+ +++ I +L+ KK LQ+ E N
Sbjct: 43 AEERERFQLEQRGNDALLEAMKEELVAANNELEAAKEEISRKNNELESVKKQLQESEARN 102
Query: 291 EXVEMSS 311
E S
Sbjct: 103 IQAEQQS 109
>02_01_0282 +
1882844-1883413,1883519-1883644,1883733-1883930,
1884442-1884666,1884844-1885224,1885282-1885989,
1886546-1886839,1887211-1887709,1887949-1888721
Length = 1257
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 DLKKSKKVL-QDIEKDNEXVEMSSDDENVVVDSEGG 347
DLK S++ D ++D+ V++ DDE +V D+E G
Sbjct: 858 DLKGSRRQSGSDDDEDDACVDIEDDDETIVEDAEVG 893
>10_08_0573 +
18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 219 QVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSEGGKKRVFN 365
QV+F +A +L K KK+ + DNE ++ S+ E + GG+K FN
Sbjct: 60 QVLFQNAMELLK-KKLEFACDIDNEGQKLMSNMEMIQAVLRGGEKMKFN 107
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 258 KKVLQDIEKDNEXVEMSSDDENVVVDSEGGKK 353
+K + +E + E +E S+DE +S+GGKK
Sbjct: 679 RKKRRRLEAEREMLEDESEDEEEAKESKGGKK 710
>07_03_1570 +
27797315-27797409,27797519-27797551,27798135-27798199,
27798406-27798493,27798579-27798651,27798975-27799081,
27799595-27799637,27799760-27799816,27799905-27799981,
27800221-27800266,27800364-27800410,27800498-27800571,
27800656-27800711,27800885-27801011,27801133-27801206
Length = 353
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 234 DAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSE-GGKKRVFNTKTLKDQNGQYP 401
D DL ++++QD +K E SDD+ + VD + K +TKT K Q+ P
Sbjct: 290 DLQDLLNRQQLVQD-DKLGEQDSDDSDDDGMDVDMDPNSSKGSRSTKTSKGQSSDRP 345
>07_03_1228 - 25009736-25010965
Length = 409
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 162 MLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV----LQDIEKDNEXVEMSSDDENVV 329
MLGVK S ++E+ + ++ ++S K+ + + + +N EM DDE
Sbjct: 236 MLGVKMLGGVGNSHILETGATLNKESTTEERSTKIGESYIYETKVENTNEEMVDDDEGEE 295
Query: 330 VDSEGGKKRVFNTKTLKDQNGQYP 401
EGG++ + +++ + P
Sbjct: 296 EPEEGGEEEEEEEEEEEEEEEEEP 319
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 63 NAMAKSIRSRWKRKCRAIKRERYAVKELXRLKKMLGVK 176
N +AKSI ++W RA+ + A E +LK K
Sbjct: 545 NDLAKSIEAKWFSLSRALTADEAAAAEATKLKSSFASK 582
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.1 bits (57), Expect = 8.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 174 KDEEKPAGSEVMESEQVIFLDAGDLKK---SKKVLQDIEKDNEXVEMSSDDENVVVDSEG 344
++EE+ A ++M + D ++K SKKV E D V+ +DD NV D +G
Sbjct: 245 EEEEEGAVGDIMYKDFFEEADDQKVRKKGGSKKVQFKDEPDEPEVDDKNDDGNVSQDEQG 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,630,764
Number of Sequences: 37544
Number of extensions: 192128
Number of successful extensions: 602
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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