Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I01
(493 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6) 42 3e-04
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.90
SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7) 29 2.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 2.8
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 2.8
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 28 3.6
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 28 4.8
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_47134| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 27 6.4
SB_56596| Best HMM Match : Gal_Lectin (HMM E-Value=2.1e-12) 27 8.4
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 27 8.4
SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_47950| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 27 8.4
SB_37688| Best HMM Match : Thioredoxin (HMM E-Value=5) 27 8.4
SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0) 27 8.4
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 27 8.4
>SB_20134| Best HMM Match : SASP_gamma (HMM E-Value=5.6)
Length = 126
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +3
Query: 69 MAKSIRSRWKRKCRAIKRERYAVKELXRLKKMLGVKD--EEKPAGSEVMESEQVIFLDAG 242
MAKS+RS+WKRK RA KR++ K +L M+G D ++ E+ +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNKEKVKQKLLDMVGTTDIVKDVTMAENTSTPEKQSNVKGN 60
Query: 243 DLKKSKKVLQDIEK----DNEXVEMSSDDENVVVDSEGGKKRVFNT-KTLK 380
+++ +KV + E+ D+ +++ V S+ KK+ F + KT+K
Sbjct: 61 NIEHVEKVTANNEETMAMDSAGDVDMGEEKRVTTKSKYVKKKKFKSKKTMK 111
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.3 bits (65), Expect = 0.90
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +3
Query: 75 KSIRSRWKRKCRAIKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKK 254
K + + K+K + K+ + + + KKM K+EE G + +E+E + +++
Sbjct: 26 KKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAEN----EEEKIEE 81
Query: 255 SKKVLQDIEKDNEXVEMSSDDENVVVDSE 341
++K + EK E + ++EN + E
Sbjct: 82 TEKEKDEEEKIEEEEKEGGEEENEEEEEE 110
>SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSEGGKKR 356
D+E+ A E++ E+ + LD G L ++ D+E +E MS + +
Sbjct: 360 DDEQDAYEEILSDEEEMSLDDGTLDEASVQFADMELYSEDAWMSVSVSFNPYQCDLSQLM 419
Query: 357 VFNTKTLKDQNGQY 398
KT +D +GQ+
Sbjct: 420 ACVIKTKEDSDGQH 433
>SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7)
Length = 210
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 249 KKSKKVLQDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 386
KK V DI + + SSDD + DSEG +K+VF++ + +++
Sbjct: 135 KKISTVSADIR--DVSTDGSSDDFSAAADSEGDEKQVFDSSSDEEE 178
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Frame = +3
Query: 114 IKRERYAVKELXRLKKMLGVK---------DEEKPAGSEVMESEQVIFLDAGDLKKSKKV 266
IK+ A++E RLK+ L + D+ K G+ + E I DL ++
Sbjct: 2547 IKKLEIALEEERRLKENLKSQVNDYRKRGDDQSKDFGTRMNELYVEIENYRTDLADKDRI 2606
Query: 267 LQD-----IEKDNEXVEMSSDDENVVVDSEGGKKRV 359
++D ++ DNE ++ D N ++DSEG K +
Sbjct: 2607 IRDQKSRQVDMDNEINKLKRDLNNQIIDSEGHFKEL 2642
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +3
Query: 3 PFTRLPSKARGVASKYFCF*NAMAKSIRSRWKRKCRAIK-RERYAVKELXRLK---KMLG 170
P++ L + R + +KY+CF ++ SR KR+ RER+ ++ + + ++LG
Sbjct: 748 PYSSLLYQKRKMQTKYWCFGTKPLQNSFSRVKREMDGNPGRERHPRRQTLKFESFAQLLG 807
Query: 171 VKDEEKPAGSE 203
D+E+ SE
Sbjct: 808 SSDDEEGERSE 818
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 165 LGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKD-NEXVEMSSDDENVVVDSE 341
+G+K EE+ E+ E ++ I LD + ++QD+E+ E +E+S+ + + D
Sbjct: 2950 VGLKHEERVNDEEIKEKDEKIHLD------EENIIQDLEETFEEELEVSAVETSKNEDER 3003
Query: 342 GGK 350
GK
Sbjct: 3004 RGK 3006
Score = 27.5 bits (58), Expect = 6.4
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +3
Query: 114 IKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQV----IFLDAGDLKKSKKVLQDIE 281
++ YAVKE + K+ V+D + A E EQV I + A D K+ + E
Sbjct: 1951 VEDSEYAVKEEQEIYKLEHVEDTQDEAFKTTHEREQVEPSLIIIAAEDTKEHEPADSRGE 2010
Query: 282 KDNEXVEMS---SDDENVVV 332
++ +E++ +D+ +VV
Sbjct: 2011 EETLDIEVAHTLEEDQMIVV 2030
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 28.3 bits (60), Expect = 3.6
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 108 RAIKRERYAVKE-LXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEK 284
R ++ ER+ +E + L + L + K + + I DL+K ++Q + K
Sbjct: 240 REVEEERHRYEEEIAHLTEQLECMERTKTEAEDKLAEMPNIAQRITDLEK---LVQQLTK 296
Query: 285 DNEXVEMSSDDENVVVDSEGGKKRVFN--TKTLKDQ 386
+N ++ + DD +V ++ G +V TK+L D+
Sbjct: 297 ENNNLKHTKDDALLVQLTQNGHYKVQQEPTKSLADE 332
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 237 AGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSE 341
+GD+ K+K+ L++++K E +E + D N + D+E
Sbjct: 3437 SGDVNKNKEELENVKKLKEELEGAKDKLNSLNDAE 3471
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 201 EVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSEGGK 350
++ ESE+VI L DL K K ++++++ +E S D+N + GK
Sbjct: 423 KLQESEKVIELRKKDLGKKDKTIEELKERIIVLEKSLKDKNDEIFGIEGK 472
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 135 VKELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDA-GDLKKSKKVLQDIEKDNEXVEMSS 311
V EL + K+ L + E E +E E + D LKK ++ L+DI++D + S
Sbjct: 1425 VHELEKAKRSLEQQLAEMKQTMEELEDELQVKEDGLRQLKKYQQQLKDIQRDLDDARASR 1484
Query: 312 DD 317
D+
Sbjct: 1485 DE 1486
>SB_47134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 270 QDIEKDNEXVEMSSD--DENVVVDSEGGKKRVFNTKTL 377
+D E++ E E+ ++ +EN V++ E GK RV + KTL
Sbjct: 185 EDSEEEEEEPEIPNELEEENEVLNQELGKLRVQHQKTL 222
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 63 NAMAKSIRSRWKRKCRAIKRERYAVKELXRLKKMLGVKDEEKPAGSEVMESE 218
NA A + W + + IKRE+ KEL K++L +++ K A S + + +
Sbjct: 565 NASATTRLRTWLEQWK-IKREKTLRKELELQKRLLAKQNKSKAASSSMWKED 615
>SB_56596| Best HMM Match : Gal_Lectin (HMM E-Value=2.1e-12)
Length = 232
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIEKDNEXVEMSSDDENV 326
+E KPA ++ E Q DA ++ ++ K + + E ++ E+ DDENV
Sbjct: 24 EEAKPASTQNEELLQ----DAPEVDETPKEMTEDETEDIPTEVEDDDENV 69
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +3
Query: 111 AIKRERYAVKELXRLKK---MLGVKDEEKPAGSE-VMESEQV 224
A+K + A +EL + K M+ V+D+E+P+GS+ V++ E V
Sbjct: 136 ALKPKFAASEELAEMSKKFVMVNVEDKEEPSGSQFVVDGEYV 177
>SB_48624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 123 ERYAVKELXRLKKMLGVKDEEKPAGSEVMESEQVI---FLDAGDLKKSKKVLQDIEKDNE 293
+++ +K++ L LGVK +KP E+ + L+ ++ SK + ++ +
Sbjct: 708 KQFKIKDMGELHHFLGVKVIQKPETGELWIGQSTYGKGVLERFGMENSKAISTPVDASTK 767
Query: 294 XVEMSSDDE 320
V+ ++D E
Sbjct: 768 LVKATNDYE 776
>SB_47950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.1 bits (57), Expect = 8.4
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 KELXRLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSK-KVLQDIEKDNEXVEMSSD 314
KE K G K++ K +EV+E D G K++K K +D E+ +E+ SD
Sbjct: 189 KEQTSRTKRKGKKEKRKRK-TEVIEISDNEASDTGKAKETKIKKKKDKERVESILEI-SD 246
Query: 315 DENVVVDSEGGKKR 356
E+ D KK+
Sbjct: 247 SESAENDENNSKKK 260
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 243 DLKKSKKVLQDIEKDNEXVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 389
+L K K+L+ DN + ++S + +D+E TK L+D N
Sbjct: 867 NLNKLAKILKQRRIDNGALTLASSEVRFFIDNETHDPIDVETKQLRDTN 915
>SB_37688| Best HMM Match : Thioredoxin (HMM E-Value=5)
Length = 119
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +3
Query: 111 AIKRERYAVKELXRLKK---MLGVKDEEKPAGSE-VMESEQV 224
A+K + A +EL + K M+ V+D+E+P+GS+ V++ E V
Sbjct: 42 ALKPKFAASEELAEMSKKFVMVNVEDKEEPSGSQFVVDGEYV 83
>SB_27494| Best HMM Match : MFAP1_C (HMM E-Value=0)
Length = 808
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 177 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLQDIE---KDNEXVEMSSDDENVVVDSE 341
DEE+ E+ Q++ L A K+++K L D+E K E E S + DSE
Sbjct: 192 DEEEIDEEEIERRRQMLRLKAQQKKEAEKDLLDLEDEVKSEEEEEEESSEYEEYSDSE 249
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 258 KKVLQDIEKDNEXVEMSSDDENVV-VDSEGGKKRVFNTKTL 377
K V +D+EKD+E EM D+ V+ + G R KTL
Sbjct: 6 KTVEKDLEKDDEKEEMEIDEVPVIQAGRQSGMHRFHLGKTL 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,747
Number of Sequences: 59808
Number of extensions: 230989
Number of successful extensions: 776
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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