Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I01
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.1  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   7.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.4  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 245 IARVQKYNLLRFHNLTSSWFLFIFDAEHFFQ 153
           +A V   N + F  L S   +  +++EHFF+
Sbjct: 310 VAEVMDRNGVLFFGLLSDLAIGCWNSEHFFE 340


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 95  EAKMQGDQTRTVCG 136
           E   +G +TRTVCG
Sbjct: 620 EGLSEGMRTRTVCG 633


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 270 VILFCFSLNRPRPEI 226
           +  FC +   PRPEI
Sbjct: 40  ITFFCMATGFPRPEI 54


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +2

Query: 14  ITFKSAWRCFKIFLF 58
           + F + W  FK+++F
Sbjct: 119 LPFSATWEVFKVWIF 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,513
Number of Sequences: 438
Number of extensions: 2506
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)