Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H20
         (508 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EWN9 Cluster: Ankyrin repeat protein, putative; n=13;...    33   2.8  
UniRef50_UPI00006A2399 Cluster: UPI00006A2399 related cluster; n...    33   3.7  
UniRef50_Q35598 Cluster: ORF-309; n=2; Physarum polycephalum|Rep...    33   3.7  
UniRef50_Q98671 Cluster: UORF4; n=3; Simian cytomegalovirus|Rep:...    32   8.6  
UniRef50_A1BDB0 Cluster: Transposase, IS4 family protein; n=3; C...    32   8.6  
UniRef50_Q9N2S6 Cluster: Seven tm receptor protein 164; n=4; Cae...    32   8.6  

>UniRef50_A2EWN9 Cluster: Ankyrin repeat protein, putative; n=13;
           Trichomonas vaginalis|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 597

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 335 TASKYYTHSTISXKILYTKMTSHAY*NNIEKINQEYSTKKLNPMIGLLLNSSF 493
           T   YY H+ ++ K+ YT+   H   N+++K ++  S+K+L  ++G   +  F
Sbjct: 65  TTVSYYLHNYLNYKLAYTRWVPHNL-NSVQKKSRVQSSKELLSILGAYQSKKF 116


>UniRef50_UPI00006A2399 Cluster: UPI00006A2399 related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A2399 UniRef100 entry -
           Xenopus tropicalis
          Length = 425

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -1

Query: 232 YFVLISLVHNAFSLVSIQLKYIGMYLFVVVVNVS*IYCKLY 110
           YF    L+HN F +V I L +I  Y+F+ ++++  IY  +Y
Sbjct: 359 YFSFHPLLHNIFYIVYILLWFIVFYIFMFLLHIVDIYIYIY 399


>UniRef50_Q35598 Cluster: ORF-309; n=2; Physarum polycephalum|Rep:
           ORF-309 - Physarum polycephalum (Slime mold)
          Length = 309

 Score = 33.1 bits (72), Expect = 3.7
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
 Frame = +3

Query: 171 YFSCMLTKLNALCTKEIKTK*HVXHRTLLLLAKTXSWLIRIMMGYMVSLQICAVXPLRST 350
           YF     KL  + TK+ +T   +  + + LL    SW  R +  YM   +   V  ++  
Sbjct: 91  YFLSNKNKL-IIWTKKSRTFILIFCKDIYLLL--ISWKPRFIKHYMFLFKFMLVYSIKQN 147

Query: 351 TLTVQFHXKYYTPK*HLTLIEIILKKSTRSIQ-RKSLT 461
            +++    KYY    +LTL ++ ++K T  I   K LT
Sbjct: 148 YISLLIQKKYYNIFTYLTLEDLFIRKETIKISWEKELT 185


>UniRef50_Q98671 Cluster: UORF4; n=3; Simian cytomegalovirus|Rep:
           UORF4 - Simian cytomegalovirus
          Length = 168

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 398 MSFWCIVFXVKLYCECSTSKRXYCTNL*GDHIPHH 294
           M  WC+   V + C C+T+    C+ L  +  PHH
Sbjct: 1   MGAWCVFICVSVLC-CATAVHGLCSELYANFTPHH 34


>UniRef50_A1BDB0 Cluster: Transposase, IS4 family protein; n=3;
           Chlorobium phaeobacteroides DSM 266|Rep: Transposase,
           IS4 family protein - Chlorobium phaeobacteroides (strain
           DSM 266)
          Length = 554

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 215 RNQNKIARXPQNTITSSEDVXMAYSDNDGVYGLLTNLCSXTASKYYTH 358
           R   KI +  Q T+   E+     +  DG++G++TN+   TAS  + H
Sbjct: 393 RKYVKIEQLSQQTVIIDEEKISYTAQWDGLHGVITNITDITASDAFEH 440


>UniRef50_Q9N2S6 Cluster: Seven tm receptor protein 164; n=4;
           Caenorhabditis|Rep: Seven tm receptor protein 164 -
           Caenorhabditis elegans
          Length = 342

 Score = 31.9 bits (69), Expect = 8.6
 Identities = 17/76 (22%), Positives = 32/76 (42%)
 Frame = +3

Query: 156 RYIPIYFSCMLTKLNALCTKEIKTK*HVXHRTLLLLAKTXSWLIRIMMGYMVSLQICAVX 335
           RY+ IYFSC     +  C   +    H   ++  +LA   +WL+     + +   +C   
Sbjct: 42  RYLMIYFSCFAMFFST-CDVIVGPFIHSFQKSFCVLADRTNWLLGETTQFALICVLCGCF 100

Query: 336 PLRSTTLTVQFHXKYY 383
            +  T   + F  +Y+
Sbjct: 101 GVTITFFVIHFVFRYF 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,580,199
Number of Sequences: 1657284
Number of extensions: 7279916
Number of successful extensions: 14727
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14726
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)