Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H20
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   4.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.4  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 298 WGIWSPYKFVQXNRFEVLH 354
           WG WS Y++    RF V H
Sbjct: 30  WGTWSTYRW-GNGRFTVDH 47


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 368 SXKILYTKMTSHAY 409
           S K+LYT +TS  Y
Sbjct: 59  SWKVLYTSLTSFGY 72


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 223 LISLVHNAFSLVSIQLK 173
           ++ ++H  FS + +QLK
Sbjct: 197 MVQIIHKKFSSIQMQLK 213


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 337 RFEVLHSQYNFTXNT-IHQNDIS 402
           R + + SQYNFT N  +H++  S
Sbjct: 95  RTQRVWSQYNFTNNVLVHRSQNS 117


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 361 YNFTXNTIH 387
           YNF  NTIH
Sbjct: 424 YNFNENTIH 432


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 179 TKIYRYVPICCS 144
           TKI+ ++P+C S
Sbjct: 22  TKIFGFLPVCSS 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,842
Number of Sequences: 336
Number of extensions: 2165
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)