Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H19
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   5.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   5.8  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.6  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   7.6  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   7.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   7.6  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   7.6  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   7.6  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   7.6  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   7.6  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   7.6  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   7.6  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 444 LVCYSRQTCDHHAEGYSTCSTNP 512
           L+   R + D     +STCS++P
Sbjct: 102 LMAILRMSADGGCRNFSTCSSHP 124


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 444 LVCYSRQTCDHHAEGYSTCSTNP 512
           L+   R + D     +STCS++P
Sbjct: 101 LMAILRMSADGGCRNFSTCSSHP 123


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 110 LQYYNINYIEQIP 122


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 110 LQYYNINYIEQIP 122


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 110 LQYYNINYIEQIP 122


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 110 LQYYNINYIEQIP 122


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 100 LQYYNINYIEQIP 112


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 100 LQYYNINYIEQIP 112


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 100 LQYYNINYIEQIP 112


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 100 LQYYNINYIEQIP 112


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 321 LQYYNINYIEQIP 333


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 332 LQYYNINYIEQIP 344


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 332 LQYYNINYIEQIP 344


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 321 LQYYNINYIEQIP 333


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 600 LKYYNIHYIIRRP 638
           L+YYNI+YI + P
Sbjct: 333 LQYYNINYIEQIP 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,467
Number of Sequences: 438
Number of extensions: 2949
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)