Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H19
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 245 2e-65
At5g10400.1 68418.m01206 histone H3 identical to several histone... 245 2e-65
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 245 2e-65
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 245 2e-65
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 245 2e-65
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 244 4e-65
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 244 4e-65
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 244 4e-65
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 234 3e-62
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 234 3e-62
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 232 1e-61
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 217 4e-57
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 177 7e-45
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 100 7e-22
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 28 4.5
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 28 6.0
At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080... 28 6.0
At2g03010.1 68415.m00253 expressed protein 28 6.0
At5g66410.1 68418.m08376 expressed protein 27 7.9
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 245 bits (600), Expect = 2e-65
Identities = 118/126 (93%), Positives = 124/126 (98%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 245 bits (600), Expect = 2e-65
Identities = 118/126 (93%), Positives = 124/126 (98%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 245 bits (600), Expect = 2e-65
Identities = 118/126 (93%), Positives = 124/126 (98%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 245 bits (600), Expect = 2e-65
Identities = 118/126 (93%), Positives = 124/126 (98%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 245 bits (600), Expect = 2e-65
Identities = 118/126 (93%), Positives = 124/126 (98%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 244 bits (597), Expect = 4e-65
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 244 bits (597), Expect = 4e-65
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 244 bits (597), Expect = 4e-65
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 121 MPKDIQ 126
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 234 bits (573), Expect = 3e-62
Identities = 112/126 (88%), Positives = 122/126 (96%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPGTVALR+IR+YQKSTE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
+LIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPK+IQ
Sbjct: 121 MPKEIQ 126
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 234 bits (573), Expect = 3e-62
Identities = 114/126 (90%), Positives = 120/126 (95%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQTARKS GGKAPR LATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LLIRKLPFQRLVREIAQD+KTDLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKD+Q
Sbjct: 121 MPKDVQ 126
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 232 bits (568), Expect = 1e-61
Identities = 113/126 (89%), Positives = 120/126 (95%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MARTKQ+ARKS GGKAP KQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
LL RKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 478 MPKDIQ 495
MPKD+Q
Sbjct: 121 MPKDVQ 126
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 217 bits (531), Expect = 4e-57
Identities = 108/127 (85%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSA-PSTGGVKKPHRYRPGTVALREIRRYQKST 294
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIR+YQKST
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 295 ELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVT 474
+LLIRKLPFQRLVREIAQDFK DLRFQS A+ ALQEA+ AYLVGLFEDTNLCAIHAKRVT
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 120
Query: 475 IMPKDIQ 495
IM KDIQ
Sbjct: 121 IMSKDIQ 127
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 177 bits (430), Expect = 7e-45
Identities = 86/126 (68%), Positives = 105/126 (83%)
Frame = +1
Query: 118 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 297
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIR+YQK+T+
Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTD 55
Query: 298 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTI 477
L+IRKLPFQRLV+EIAQ K DLRFQ+ A+ ALQEA+ A++VG+FEDTNLCA+HAKR TI
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTI 115
Query: 478 MPKDIQ 495
MPKDIQ
Sbjct: 116 MPKDIQ 121
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 100 bits (240), Expect = 7e-22
Identities = 59/125 (47%), Positives = 77/125 (61%), Gaps = 2/125 (1%)
Frame = +1
Query: 127 TKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLI 306
T+QT ++ R+ K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI
Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLI 101
Query: 307 RKLPFQRLVREIAQDFKTDL--RFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTIM 480
F R VR I R+ + A+ ALQEA+ YLVGLF D+ LCAIHA+RVT+M
Sbjct: 102 PAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLM 161
Query: 481 PKDIQ 495
KD +
Sbjct: 162 RKDFE 166
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 182 ASCLRGALPPVDLRAVCLVRAIVYFFNVFH 93
A C +G +P + L A+ V ++F VFH
Sbjct: 132 AQCKKGYVPLISLNALHQVHIFIFFLAVFH 161
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = -2
Query: 531 NLSTFTTDSSSKLN---ILRHDGHTFGVNSTQVGVFEQANEISXACLLESSDGGRLETQI 361
N+S T ++LN + GH G N+ + +F+Q N C++ G +E
Sbjct: 20 NISDHYTRVKTQLNPPASICASGH--GSNNGEA-MFQQ-NPRVYGCVIGVQRGRTVEIFN 75
Query: 360 SFEILSDFSHKTLERQLTDKQ 298
SFE+L D S +TL+R +K+
Sbjct: 76 SFELLYDPSTQTLDRSFLEKK 96
>At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 415
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 567 YRITSNQNYN*XNLSTFTTDSSSKL-NILRHDGHTFGVNSTQVGVF 433
YR +S +NY N + SS+ N+L +GH + + GVF
Sbjct: 133 YRASSVENYGMKNQKSIPKPKSSEPPNVLTQNGHQHAIMYVEDGVF 178
>At2g03010.1 68415.m00253 expressed protein
Length = 246
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -2
Query: 510 DSSSKLNILRHDGHTFGVNSTQVGVFEQANEISXACLLESSDGGRLETQISFEILS-DFS 334
D+ S+L +LR+ + + GV E+ N+ + + E DGG + + +S S
Sbjct: 156 DAESRLEVLRNVRGLAPLTGGREGVLEKRNDENDSVRGEGDDGGCGGYEAKKKKMSGKKS 215
Query: 333 HKTLERQLTDKQLSRLL 283
K L+R+ +K+ R L
Sbjct: 216 LKELKRERVEKERERAL 232
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +1
Query: 304 IRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASXAYLVGLFEDTNLCAIHAKRVTIMP 483
+ L F ++ A+D+K ++ A G+ L L +D L +HA R+ +
Sbjct: 10 LSNLAFGNVLAAAARDYKKEVLANEKAQGSRPVNEEVDLDELMDDPELEKLHADRIAALR 69
Query: 484 KDIQ 495
++++
Sbjct: 70 REVE 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,949,460
Number of Sequences: 28952
Number of extensions: 214093
Number of successful extensions: 572
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -