Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H18
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0484 + 3439365-3439474,3439574-3439699,3439700-3439851,344...    29   2.4  

>06_01_0484 +
           3439365-3439474,3439574-3439699,3439700-3439851,
           3440129-3440238,3440872-3440957,3441463-3441573,
           3441679-3441799
          Length = 271

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 183 HFNFFQTIYSGLLRHHKSC*GNKYSKLLNSKVGYFGCPIVA 61
           H   ++  + G+L  H++   ++  K+LN  V YFG P+ A
Sbjct: 76  HICRYEDRFDGVLLAHEATVESEQGKILNGLVPYFGVPVHA 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,701,831
Number of Sequences: 37544
Number of extensions: 225006
Number of successful extensions: 237
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)