Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H18
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23454-2|AAC46519.2|  368|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical ...    28   6.6  

>U23454-2|AAC46519.2|  368|Caenorhabditis elegans Hypothetical
           protein C10A4.5 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 114 IYYLNRTCDVLKDPSKWFEKN*SVLIFELIFF 209
           +YYLN+   V  +  +W E N  + +F ++ F
Sbjct: 127 VYYLNKQSHVCLNVPEWLEHNMEITVFLVVAF 158


>AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical
           protein Y57A10C.10 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 114 YSKLLNSKVGYFGCPIVALARSVILGYVDVVLVQLT 7
           Y  +L  K+ +  C  + +  SV+LG++D VL   T
Sbjct: 65  YFPILYRKMDHVDCSNLLMLISVLLGFIDTVLAMCT 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,719,048
Number of Sequences: 27780
Number of extensions: 229894
Number of successful extensions: 361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)