Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H16
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.8  

>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 6/18 (33%), Positives = 15/18 (83%)
 Frame = +1

Query: 385 QTKSKDNYKIITGEHQQM 438
           +T++KD Y+++  +HQ++
Sbjct: 152 KTRTKDKYRVVYTDHQRV 169


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
 Frame = +2

Query: 302 SARGQKLPSSGRIINRKITMSAKSTTPRKRNQRITTRLSQENINKCNKSXXRQRARTFVT 481
           S R  K+    R +  K     K +TPR       + LS +++     S   Q     ++
Sbjct: 128 SERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLS 187

Query: 482 ---------WYKQMIDNERQ 514
                    WY Q IDN  Q
Sbjct: 188 HAPIDSANQWYSQTIDNSYQ 207


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
 Frame = +2

Query: 302 SARGQKLPSSGRIINRKITMSAKSTTPRKRNQRITTRLSQENINKCNKSXXRQRARTFVT 481
           S R  K+    R +  K     K +TPR       + LS +++     S   Q     ++
Sbjct: 119 SERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLS 178

Query: 482 ---------WYKQMIDNERQ 514
                    WY Q IDN  Q
Sbjct: 179 HAPIDSANQWYSQTIDNSYQ 198


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 14/63 (22%), Positives = 25/63 (39%)
 Frame = +2

Query: 395 QRITTRLSQENINKCNKSXXRQRARTFVTWYKQMIDNERQNLALYLADDAFLEWFGRTIK 574
           +R+     Q N  KC +       R+     K+      Q  A++  DD F+  F  + +
Sbjct: 61  KRVLPEALQTNCAKCTEKQRTAAYRSIKRLKKEYPKIWEQLRAVWDPDDVFIRKFETSFE 120

Query: 575 TRK 583
           + K
Sbjct: 121 SGK 123


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 508 FVVYHLLVPCY 476
           F V HLL+ CY
Sbjct: 41  FAVEHLLIQCY 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,302
Number of Sequences: 336
Number of extensions: 2943
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)