Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H16
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 37 0.016
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 34 0.11
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 33 0.15
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 31 0.80
04_04_0340 + 24517562-24520318 30 1.4
09_06_0245 - 21833622-21833901,21833988-21834059,21834152-218342... 29 3.2
04_04_0634 - 26777889-26778452,26778526-26778797,26778905-267791... 29 3.2
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 29 4.2
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 5.6
03_01_0614 + 4515515-4515540,4515988-4516209,4516681-4516768,451... 28 7.4
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 27 9.8
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 27 9.8
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 27 9.8
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 27 9.8
>10_08_0043 -
14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 108 KMNSTVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQG 287
K+N + EN+ SE+ K +++L+ NR+ LL +EL + S+K E + +Q
Sbjct: 374 KLNELKQTKVNLENAVSELKKEVENLTEQNRSSELLIQELRDEINSLKDSKNELQNEIQS 433
Query: 288 LR 293
LR
Sbjct: 434 LR 435
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +3
Query: 126 SDDLTRENSASEISKCIKDLSANNRNLSL---LHKELLEINLSVKTYVQESKKRLQGLRL 296
++DLTR N E +K + N + L E+L + S+ E+ K L+GL
Sbjct: 1291 NEDLTRRNQLMEKELDLKTSQNKDENTNKQVSLQDEVLMLQSSLDEAKFENGK-LEGLLQ 1349
Query: 297 DLAHEARSSHQVVELLTEK*QCQQSQQHRANEIK 398
L+ E +LT+K C Q + ANE K
Sbjct: 1350 SLSEECEELKAQKGMLTDKVSCMQDTLNAANEGK 1383
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 132 DLTRENSASEISKCIKDLSANN---RNLSLLHKELLEINLSVKTYVQESKKRLQGLRLDL 302
+L ++S E + I+++S ++ L E+L + S+ E K +L+GL L
Sbjct: 1146 ELKSKSSDYEKQQIIEEISVLKIQVHKIAGLQDEVLTLQSSLDEAKFE-KGKLEGLIQSL 1204
Query: 303 AHEARSSHQVVELLTEK*QCQQSQQHRANEIK 398
+ E +LT+K C Q + ANE K
Sbjct: 1205 SEECEELKAQKGMLTDKVSCMQDTLNAANEGK 1236
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 108 KMNSTVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQG 287
K+N + EN+ SE+ K ++ L+ NR+ LL +EL + S+ E + +Q
Sbjct: 594 KLNELKQTKVNLENAVSELKKEVESLTEQNRSSELLIQELRDEINSLTDSRNELQNEIQS 653
Query: 288 LR 293
LR
Sbjct: 654 LR 655
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +3
Query: 117 STVSDDLTRENSASE---ISKCIKDLSANNRN--LSLLHKELLEINLSVKTYVQE 266
S D+L EN + + C KD+ +R+ ++LL+KEL I V+TY++E
Sbjct: 780 SNERDNLFEENEQKDKELAANCQKDMFLQDRDAEIALLNKELASIKDQVQTYLEE 834
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +3
Query: 144 ENSASEISKCIKDLSA----NNRNLSLLHKELLEINLSVKTYVQESKKRLQGLRLDLAHE 311
+ S SE+ +KDL N+ +SLLH+E LE + + S G ++D++
Sbjct: 448 QESNSELLLAVKDLDEMLEQKNKEISLLHEETLEDPQEAEYELALSNVHNAGHKIDISET 507
Query: 312 ARSSHQVVELLTE 350
+ + EL+ +
Sbjct: 508 SSVQEKEDELMLD 520
>04_04_0340 + 24517562-24520318
Length = 918
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 204 LSLLHKELLEINLSVKTYVQESKKRLQGLRLDLAHEARSSHQV 332
L L+H+E+ I V + + +R+ AHEA SSHQ+
Sbjct: 402 LQLIHEEITNIRGKVDDSFKVQEVSCHVMRMAAAHEASSSHQL 444
>09_06_0245 -
21833622-21833901,21833988-21834059,21834152-21834231,
21834366-21835109,21835212-21835547
Length = 503
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 99 EDCKMNSTVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELLEIN 239
+D + +D + EN+ E+S+ +LS+ NRNL+ +++ I+
Sbjct: 349 DDDSASDLANDKVLVENTKKELSRIQAELSSTNRNLNFSDQQIEAIS 395
>04_04_0634 -
26777889-26778452,26778526-26778797,26778905-26779117,
26779497-26779578
Length = 376
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 184 FPLITETSHYYTKNFWKLTFRLKPMYRRVKN 276
+P T T+ T FWK T R KP+Y VKN
Sbjct: 121 YPTGTRTNRATTAGFWKATGRDKPIY--VKN 149
>09_01_0014 +
357398-357583,360213-360323,360520-360676,361067-361233,
362012-362122,362206-362349,362436-362476,364134-364174,
364175-364261,365402-365724
Length = 455
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 479 TWYKQMIDNERQNLALYLADDAFLEWFGRTIKTR--KKVSAFLKHD 610
TW+ I++ Q+L LAD+ F W G TR K S F HD
Sbjct: 103 TWF---INSAEQSLGYILADNGFDVWIGNVRGTRWSKGHSTFSVHD 145
>01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.3 bits (60), Expect = 5.6
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Frame = +3
Query: 129 DDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQGLR----- 293
D R+ +++ + K L NR+ L KEL E N T E K + L
Sbjct: 647 DSEARKALEADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKKMLSKALAEQQKI 706
Query: 294 LDLAHEARSSHQ--VVELLTEK*QCQQSQQHRANEI---KG*LQDYHRRTSTNVTNXXK 455
AHE Q + L TEK + +H E+ KG + R+ ST+ + K
Sbjct: 707 TTEAHENTEDAQNLISRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAK 765
>03_01_0614 +
4515515-4515540,4515988-4516209,4516681-4516768,
4517084-4517123,4517259-4517305,4517464-4517584,
4517931-4518091
Length = 234
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 129 DDLTRENS-ASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKK 275
D++ R S A+ + K K ++ + LH++ LE ++ + T+VQ+ KK
Sbjct: 165 DEIMRSYSPAALLDKLQKSMAKLDEESEELHQKFLEKDIDLPTFVQKYKK 214
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 344 NRKITMSAKSTTPRKRNQRITTRLSQENINKCN 442
N+K+T + T P KR +++ +++ KCN
Sbjct: 492 NKKVTQESTKTNPSKRRVTRRFKIANKSMLKCN 524
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 344 NRKITMSAKSTTPRKRNQRITTRLSQENINKCN 442
N+K+T + T P KR +++ +++ KCN
Sbjct: 492 NKKVTQESTKTNPSKRRVTRRFKIANKSMLKCN 524
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 344 NRKITMSAKSTTPRKRNQRITTRLSQENINKCN 442
N+K+T + T P KR +++ +++ KCN
Sbjct: 492 NKKVTQESTKTNPSKRRVTRRFKIANKSMLKCN 524
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 344 NRKITMSAKSTTPRKRNQRITTRLSQENINKCN 442
N+K+T + T P KR +++ +++ KCN
Sbjct: 671 NKKVTQESTKTNPSKRRVTRRFKIANKSMLKCN 703
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,220
Number of Sequences: 37544
Number of extensions: 258358
Number of successful extensions: 583
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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