Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H16
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 33 0.27
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 29 2.5
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 29 2.5
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16) 29 3.3
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 29 4.3
SB_50868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 28 7.6
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 28 7.6
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 36.3 bits (80), Expect = 0.022
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +3
Query: 93 AVEDCKMNSTVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESK 272
A E K S ++ T++ A + K KD++ + L KEL+E + ++ ++ S+
Sbjct: 1615 AKEKIKQGSARQEEQTKKYKAYQ-EKREKDVAELREKVQSLEKELMETSEKLREDLRGSE 1673
Query: 273 KRLQGLRLDL-AHEARS---SHQVVELLTEK*QCQQSQQHRANEIKG*LQDYHRRTSTNV 440
KR + L+L L A E+ + ++ EL EK + Q+ K +Q + ++
Sbjct: 1674 KREEELKLKLEAGESNNQAIDKKIAELSAEKQEIIQTSAKAEEAFK--IQIHELKSQFET 1731
Query: 441 TNXXKDSEL 467
TN ++EL
Sbjct: 1732 TNQTYENEL 1740
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +3
Query: 117 STVSDDLTRENSASEISKCIKDLSANNRNLSLLHK-ELLEINLSVKTYVQESKKRLQGLR 293
STVS D R +E+S +ANNR +S K + ++ ++ Y Q ++ QG
Sbjct: 148 STVSGDEDRRQPVAEMSSPGVLKTANNRGVSQAQKSSVSDVEQQIQRY-QTTQPLQQGYT 206
Query: 294 LDLAHEARSSHQVVELLTEK*QCQQSQQHRANE 392
+ R + E ++ Q Q QQHR +
Sbjct: 207 EQWHQDNRERYDRREKAAQRQQQQHLQQHRQQQ 239
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 314 QKLPSSGRIINRKITMSAKSTTPRKRNQRITTRLSQENINKCNKSXXRQ-RARTFVT 481
QK P G+ N+K A++ TP + R T R ++ + + K+ Q RART T
Sbjct: 52 QKPPEEGK--NKKHQKKARTETPEEGKNRNTRRRQEQKLPEEGKNKKHQKRARTETT 106
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 117 STVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESK 272
+++ D+L + A +++ KD A N L E+ E+NL +K+Y QE++
Sbjct: 302 TSLEDELIKSQRAHHVTRRGKD-EAEKANFKL-KTEVTELNLKLKSYQQENE 351
>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
Length = 298
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 314 QKLPSSGRIINRKITMSAKSTTPRKRNQRITTRLSQENINKCNKSXXRQRARTFVTWYKQ 493
Q+L RI R + S+ S RKR ITT ++ +N C+ + +R
Sbjct: 215 QQLKDRARIPYRNYSRSSLSDRSRKRPAPITTTITNHRLN-CHTNSVILSSRKRPAPITT 273
Query: 494 MIDNERQN 517
MI N R N
Sbjct: 274 MITNHRLN 281
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +3
Query: 108 KMNSTVS-DDLTRENSASEISKCIKDLSANNRNLSLLHKELLEINLSVKTYVQESKKRLQ 284
KM S D T+E +E++KC+++ + +L+L +E K +Q +K++
Sbjct: 299 KMESEYKIDKATKEQEFAELAKCVEEKTKTVEHLTLALEE-------AKDELQVAKRKNA 351
Query: 285 GLRLDLAHEARSSHQVVELLTEK*QCQQSQQHRANEIK 398
DL + + S + VE + Q++ Q+ N+ K
Sbjct: 352 STIKDLTRQLQQSRRQVEKMESN---QENLQNGNNDSK 386
>SB_50868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 141 RENSASEISKCIKDLSANNRNLSLLHKELLEINLSVK 251
R+N+ EI K K + NN+ + LHKEL N +++
Sbjct: 461 RDNN-KEIRKNNKKIRGNNKEIETLHKELNTANQTIR 496
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Frame = +3
Query: 114 NSTVSDDLTRENSASEISKCIKDLSANNRNLSLLH--------KELLEINLSVKTYVQES 269
NS++ ++LTR +S KC D + N+++ KEL+ +K +QES
Sbjct: 368 NSSLRNNLTRTSSQVTKLKCELDNAQRNKSIGSAELGGERSKVKELVHEIAELKEKLQES 427
Query: 270 KKRLQGLRLDLAHEARSSHQVVE 338
+K ++ + DL + ++ ++ E
Sbjct: 428 EKVIELRKKDLGKKDKTIEELKE 450
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 108 KMNSTVSDDLTRENSASEISKCIKDLSANNRNLSLLHKELL 230
K+N+ +SD +ENS E+++ +KD ++ L+ E +
Sbjct: 191 KINALISDLQKKENSLEEMTELLKDTQTRLQSEKLVKNEYI 231
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,770,060
Number of Sequences: 59808
Number of extensions: 331190
Number of successful extensions: 790
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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