Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H11
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF016681-6|AAB66175.2|  317|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical
           protein C03F11.1 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 383 LEKFKTPXYIMEPXIFGQLKRYFQAGGNPQQVIEQLSMNYNAVXXMAN 526
           L  F    +I+   +F Q +RY  +G NPQ ++   S+ + A+  M N
Sbjct: 267 LTTFTFIFWIIMSWMFVQCERYGFSGKNPQSILYSNSLWFIAITFMLN 314


>AF016681-6|AAB66175.2|  317|Caenorhabditis elegans Hypothetical
           protein F22E5.11 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +2

Query: 29  KKRFFSYLMNIXCFNFDNQXP---QHHKFVVCLKLYVYLFRLIFI 154
           K    S L+N+    FD+Q P    H KF++ + + + L +LIF+
Sbjct: 20  KDNIRSSLVNLKLL-FDSQEPPEFDHQKFIMSIVIMILLLKLIFL 63


>Z81552-4|CAB04488.2|  765|Caenorhabditis elegans Hypothetical
           protein F56G4.6 protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -2

Query: 178 CFYSCLHGNKD*SEKVHVQL*TNNKFMM 95
           C++S L   K+ S +VH+Q+  N++F++
Sbjct: 160 CYFSVLLSLKNASSQVHIQIPANDEFVL 187


>U80029-9|AAB37588.1|  459|Caenorhabditis elegans Hypothetical
           protein T20D4.9 protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = -2

Query: 259 YIKLHSTSIKYNIY*I*SKQLLLLITMCFYSCLHGNKD*SEKVHVQL*TNNKFMMLRPLI 80
           YIK  + S K++      K + L +T  FY+ L+ N +   ++++     NKF  L  + 
Sbjct: 84  YIKKKNNSEKFSFMVETLKNVNLTLTNIFYNSLYANIEVLNQLNLPASEENKF--LHHIF 141

Query: 79  IKVKTXNIH*I*KKPFFSKHKQTF 8
             +K   I  I    F  + K+ F
Sbjct: 142 NMLKNNTIEEIWSSSFSDESKKEF 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,083
Number of Sequences: 27780
Number of extensions: 240042
Number of successful extensions: 375
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)