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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H08
         (629 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|...    31   0.10 
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce...    28   0.97 
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha...    27   1.7  
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch...    27   1.7  
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar...    27   1.7  
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha...    27   1.7  
SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|...    27   3.0  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    26   5.2  
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos...    26   5.2  
SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy...    25   6.8  
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi...    25   6.8  
SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces pomb...    25   6.8  
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po...    25   9.0  
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch...    25   9.0  

>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 230

 Score = 31.5 bits (68), Expect = 0.10
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = -3

Query: 234 RCLNLFIYFGIFFLSLSDRCDLETSTT*GVIIHF*AF--LNFFWYLLVSFVIFIIR*TML 61
           RCL LF +F +FFLS S         +   I++F +F  L+F ++  +   +F+     L
Sbjct: 114 RCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLFSL 173

Query: 60  SFANSITITYI 28
           S   S+ I ++
Sbjct: 174 SHLLSLAILFL 184


>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2310

 Score = 28.3 bits (60), Expect = 0.97
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +1

Query: 127  CSEMYYHPLRRGSFQVTSIR----QAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPPT 294
            C ++    LR G    T I+     +Q K+  +  K  A+  +LAA G +   +S++PP 
Sbjct: 1441 CGQLLSSKLRLGPLLTTVIKLVIEYSQAKHAAIILK-DASNYTLAAHGNVEKAESFEPPV 1499

Query: 295  NINETILKI 321
             ++++ +KI
Sbjct: 1500 ILSQSDVKI 1508


>SPBC1348.02 |||S. pombe specific 5Tm protein
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 344

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457
           L +W    L FSK++   Q ++CL  F   L Q +
Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145


>SPBPB2B2.19c |||S. pombe specific 5Tm protein
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 344

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457
           L +W    L FSK++   Q ++CL  F   L Q +
Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145


>SPAC977.01 |||S. pombe specific 5Tm protein
           family|Schizosaccharomyces pombe|chr 1||Partial|Manual
          Length = 316

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457
           L +W    L FSK++   Q ++CL  F   L Q +
Sbjct: 83  LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 117


>SPAC750.05c |||S. pombe specific 5Tm protein
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 344

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457
           L +W    L FSK++   Q ++CL  F   L Q +
Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145


>SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 199

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 367 DTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFY 474
           + +   +K  Y++TG  V ++ L  I   DDL  +Y
Sbjct: 112 EARLQAVKLAYQKTGRIVYDAPLQNIHNWDDLYNYY 147


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1016

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +1

Query: 391  ACYEETGHSVPNSLL--HTIETVDDLTEFYKTPVYTTTP 501
            ACY  + +   +  L  +T+ T    T F  TP  TTTP
Sbjct: 913  ACYNPSQYVCSDGSLSPNTVTTTKATTTFTPTPTTTTTP 951


>SPCC1450.11c |cek1||serine/threonine protein kinase
           Cek1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1338

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +1

Query: 316 KICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYK-----T 480
           + C  C     S F  L +KF +  + YE    +  +SLL+   T+ ++ E  +      
Sbjct: 212 EFCQICEREIQSWFFELHSKFCLSTSTYESVVQAAQDSLLYFRSTLLEIQEGMQKDSSLV 271

Query: 481 PVYTTTP 501
           PVY   P
Sbjct: 272 PVYKNEP 278


>SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 375

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 541 VDFWVDPLTSEHQTV*LCTQVFCKILLGHQL 449
           +DFW +PL  EH  V +  Q    ++  H +
Sbjct: 266 LDFWNEPLYKEHNGVFVEQQALSHMIYSHPI 296


>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 984

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 148 GDNTFLSIS*FFLVSTSQFCYIYNSLNNVIFREQH 44
           GD+  +S S   L   S+   + NSL+N  F E H
Sbjct: 877 GDDGAISRSILLLEQISENSVVVNSLHNYFFAEAH 911


>SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 240

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +1

Query: 424 NSLLHTIETVDDLTEFYKTPVYTTTPFDAL-KLMDLPKNLHVQKDYVXFHPDTDTLF 591
           NS    I  +D L E+ +        F  + KL+D    LHV +  V  HP + TLF
Sbjct: 58  NSTTPCIYALDSLLEYQQNEEAYEKNFQFIQKLID--DLLHVIEGLVLIHPKSQTLF 112


>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1564

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +1

Query: 337 LNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPV 486
           LN N   E  + K ++      ++ HS+  S L +++ + D+T + +  V
Sbjct: 49  LNSNKTTEGEEAKLSIY-----DSSHSISKSQLESVKKISDITGYNEAQV 93


>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 862

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 178 SIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPPTN 297
           ++R+A   +P VD  + + ++  +    +RPT    PP N
Sbjct: 745 AVREADVYHPHVDTSIDSLSQISSQPFEMRPTAIPPPPKN 784


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,680,605
Number of Sequences: 5004
Number of extensions: 55604
Number of successful extensions: 147
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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