BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_H08 (629 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.10 SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 28 0.97 SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 27 1.7 SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 27 1.7 SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 27 1.7 SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 27 1.7 SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 3.0 SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 5.2 SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 26 5.2 SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy... 25 6.8 SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 6.8 SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces pomb... 25 6.8 SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 9.0 SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 9.0 >SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 230 Score = 31.5 bits (68), Expect = 0.10 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -3 Query: 234 RCLNLFIYFGIFFLSLSDRCDLETSTT*GVIIHF*AF--LNFFWYLLVSFVIFIIR*TML 61 RCL LF +F +FFLS S + I++F +F L+F ++ + +F+ L Sbjct: 114 RCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLFSL 173 Query: 60 SFANSITITYI 28 S S+ I ++ Sbjct: 174 SHLLSLAILFL 184 >SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 2310 Score = 28.3 bits (60), Expect = 0.97 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = +1 Query: 127 CSEMYYHPLRRGSFQVTSIR----QAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPPT 294 C ++ LR G T I+ +Q K+ + K A+ +LAA G + +S++PP Sbjct: 1441 CGQLLSSKLRLGPLLTTVIKLVIEYSQAKHAAIILK-DASNYTLAAHGNVEKAESFEPPV 1499 Query: 295 NINETILKI 321 ++++ +KI Sbjct: 1500 ILSQSDVKI 1508 >SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccharomyces pombe|chr 2|||Manual Length = 344 Score = 27.5 bits (58), Expect = 1.7 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457 L +W L FSK++ Q ++CL F L Q + Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145 >SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosaccharomyces pombe|chr 2|||Manual Length = 344 Score = 27.5 bits (58), Expect = 1.7 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457 L +W L FSK++ Q ++CL F L Q + Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145 >SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosaccharomyces pombe|chr 1||Partial|Manual Length = 316 Score = 27.5 bits (58), Expect = 1.7 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457 L +W L FSK++ Q ++CL F L Q + Sbjct: 83 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 117 >SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccharomyces pombe|chr 1|||Manual Length = 344 Score = 27.5 bits (58), Expect = 1.7 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 356 LKHWTQN-LQFSKLVMKKQAIVCLIHFCIQLKQLM 457 L +W L FSK++ Q ++CL F L Q + Sbjct: 111 LSYWIWTCLHFSKIIFPAQKVICLYIFLFALNQTL 145 >SPCC24B10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 199 Score = 26.6 bits (56), Expect = 3.0 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 Query: 367 DTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFY 474 + + +K Y++TG V ++ L I DDL +Y Sbjct: 112 EARLQAVKLAYQKTGRIVYDAPLQNIHNWDDLYNYY 147 >SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1016 Score = 25.8 bits (54), Expect = 5.2 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +1 Query: 391 ACYEETGHSVPNSLL--HTIETVDDLTEFYKTPVYTTTP 501 ACY + + + L +T+ T T F TP TTTP Sbjct: 913 ACYNPSQYVCSDGSLSPNTVTTTKATTTFTPTPTTTTTP 951 >SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1338 Score = 25.8 bits (54), Expect = 5.2 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +1 Query: 316 KICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYK-----T 480 + C C S F L +KF + + YE + +SLL+ T+ ++ E + Sbjct: 212 EFCQICEREIQSWFFELHSKFCLSTSTYESVVQAAQDSLLYFRSTLLEIQEGMQKDSSLV 271 Query: 481 PVYTTTP 501 PVY P Sbjct: 272 PVYKNEP 278 >SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 375 Score = 25.4 bits (53), Expect = 6.8 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = -2 Query: 541 VDFWVDPLTSEHQTV*LCTQVFCKILLGHQL 449 +DFW +PL EH V + Q ++ H + Sbjct: 266 LDFWNEPLYKEHNGVFVEQQALSHMIYSHPI 296 >SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 984 Score = 25.4 bits (53), Expect = 6.8 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = -2 Query: 148 GDNTFLSIS*FFLVSTSQFCYIYNSLNNVIFREQH 44 GD+ +S S L S+ + NSL+N F E H Sbjct: 877 GDDGAISRSILLLEQISENSVVVNSLHNYFFAEAH 911 >SPBC24C6.07 |cdc14||SIN component Cdc14|Schizosaccharomyces pombe|chr 2|||Manual Length = 240 Score = 25.4 bits (53), Expect = 6.8 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +1 Query: 424 NSLLHTIETVDDLTEFYKTPVYTTTPFDAL-KLMDLPKNLHVQKDYVXFHPDTDTLF 591 NS I +D L E+ + F + KL+D LHV + V HP + TLF Sbjct: 58 NSTTPCIYALDSLLEYQQNEEAYEKNFQFIQKLID--DLLHVIEGLVLIHPKSQTLF 112 >SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces pombe|chr 1|||Manual Length = 1564 Score = 25.0 bits (52), Expect = 9.0 Identities = 12/50 (24%), Positives = 25/50 (50%) Frame = +1 Query: 337 LNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEFYKTPV 486 LN N E + K ++ ++ HS+ S L +++ + D+T + + V Sbjct: 49 LNSNKTTEGEEAKLSIY-----DSSHSISKSQLESVKKISDITGYNEAQV 93 >SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr 3|||Manual Length = 862 Score = 25.0 bits (52), Expect = 9.0 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = +1 Query: 178 SIRQAQKKYPKVDKKVQAAAESLAARGFLRPTKSWDPPTN 297 ++R+A +P VD + + ++ + +RPT PP N Sbjct: 745 AVREADVYHPHVDTSIDSLSQISSQPFEMRPTAIPPPPKN 784 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,680,605 Number of Sequences: 5004 Number of extensions: 55604 Number of successful extensions: 147 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 147 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 279695522 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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