Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H08
         (629 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical pr...    66   3e-11
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p...    32   0.39 
Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical pr...    31   0.51 
U80843-6|AAB37971.1|  345|Caenorhabditis elegans Skn-1 dependent...    27   8.4  

>Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical
           protein T21B10.1 protein.
          Length = 285

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 12/137 (8%)
 Frame = +1

Query: 238 ESLAARGFLRPTKSWDPPTNINETILKICATCGLNGNSEFEALD----------TKFTVL 387
           +++ ARGFL+ T+++ P  ++   +L+  ++C  +   + E +D           KF +L
Sbjct: 78  DAIRARGFLKYTQNYVPGVDVKNQVLEAASSCLRSAGVKSENVDQYKFVEGDNSVKFELL 137

Query: 388 KACYEETGHSVPNSLLHTIETVDDLTEFYKTPVYTTTPF-DALKLMDLPKNLHVQKDYVX 564
               +   H   N  L  +ETV D+ EFY+TPV   T + +  +  + PKN+ + +    
Sbjct: 138 NRLGKSIEHWPTNGKLLHLETVADVVEFYQTPVKNVTKYTEMARDENKPKNVSIMEHAAR 197

Query: 565 FHP-DTDTLFNGVSAFP 612
           FHP DT     G++AFP
Sbjct: 198 FHPEDTHMYHGGITAFP 214


>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
           protein F26G1.1 protein.
          Length = 1021

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 319 ICATCGLNGNSEFEALDTKFTVLKACYEETGHSVPNSLLHTIETVDDLTEF 471
           +C++  L     F  LD    ++  C E+ G    NSL+H IET+ + T+F
Sbjct: 715 VCSSLSLIDFQAFTNLDQCIELIVRCREDMGLR-QNSLIHIIETLFNFTQF 764


>Z92832-6|CAB07375.2|  572|Caenorhabditis elegans Hypothetical
           protein F31D4.7 protein.
          Length = 572

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 268 PTKSWDPPTNI--NETILKICATCGLNGNSEFEALDT 372
           PTKS D  TN+   ET L++C   G N N EF   ++
Sbjct: 513 PTKSPDEVTNLVEYETALRVCEQIGDNNNEEFSEAES 549


>U80843-6|AAB37971.1|  345|Caenorhabditis elegans Skn-1 dependent
           zygotic transcriptprotein 4 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 367 DTKFTVLKACYEETGHSVPNSLLHTIETVDDL 462
           D   T+ K  Y+ T H+  N  LH I+  D+L
Sbjct: 52  DHSITINKDTYQFTVHNTKNGFLHDIDERDEL 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,740,298
Number of Sequences: 27780
Number of extensions: 317856
Number of successful extensions: 827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)