BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_H08 (629 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g20150.1 68414.m02520 subtilase family protein similar to sub... 29 2.5 At5g08240.1 68418.m00967 expressed protein 29 3.4 At4g10360.1 68417.m01701 expressed protein 29 3.4 At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 28 4.4 At4g38640.1 68417.m05469 choline transporter-related contains we... 28 5.9 At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 27 7.8 >At1g20150.1 68414.m02520 subtilase family protein similar to subtilisin-type protease precursor GI:14150446 from [Glycine max] Length = 780 Score = 29.1 bits (62), Expect = 2.5 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -3 Query: 234 RCLNLFI-YFGIFFLSLSDRCDLETSTT*GVIIH 136 RCL + I +F FFLS+ +C ETS + II+ Sbjct: 3 RCLTITIMFFMFFFLSVIQKCKSETSKSGDYIIY 36 >At5g08240.1 68418.m00967 expressed protein Length = 258 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3 Query: 522 GSTQKSTCSKRLCXISSRYG 581 GS ++ TC++R+ ISSRYG Sbjct: 139 GSFKEDTCTERISSISSRYG 158 >At4g10360.1 68417.m01701 expressed protein Length = 266 Score = 28.7 bits (61), Expect = 3.4 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = -1 Query: 212 TLGYFF*ACLIDVTWKLPRRKG**YISEHFLIFFGIY*SV 93 +LGYF A L + W P G Y+ HFL F I SV Sbjct: 108 SLGYFL-ADLAMIFWYFPTLGGIEYVFHHFLSMFAIILSV 146 >At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost identical to CIP1 (GI:836950) [Arabidopsis thaliana] Length = 1305 Score = 28.3 bits (60), Expect = 4.4 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 86 ITKLTSRYQKKLRNAQKCIITPYVVEVSRSHLSDKLKKNIPK 211 +T+ RY+K + A K + T + R+H +K+ K I K Sbjct: 1190 LTEKQGRYEKTVMEASKILWTATNWVIERNHEKEKMNKEIEK 1231 >At4g38640.1 68417.m05469 choline transporter-related contains weak similarity to CD92 protein [Homo sapiens] gi|16945323|emb|CAC82175 Length = 556 Score = 27.9 bits (59), Expect = 5.9 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = -3 Query: 231 CLNLFIYFGIFF-LSLSDRCDLETSTT*GVIIHF*AFLNFFWYLLVSFVIFII 76 CL LF+ F IFF + C L +S + + + + + F +L++ +++II Sbjct: 175 CLPLFVLFPIFFNVYWFVACTLSSSCSDALPLAYRILVLVFVFLIIGIIVWII 227 >At3g43890.1 68416.m04698 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 661 Score = 27.5 bits (58), Expect = 7.8 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +1 Query: 286 PPTNINETILKICATCGLNGN-SEFEALDTKFTVLKAC 396 P T + ++I C TCGLNG+ S + L FT C Sbjct: 253 PLTLMPKSISFTCTTCGLNGDRSPYVCLPCDFTSHNDC 290 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,562,333 Number of Sequences: 28952 Number of extensions: 272139 Number of successful extensions: 657 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 657 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1285411824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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