Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H05
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 188 3e-48
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 185 3e-47
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 172 2e-43
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 165 2e-41
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 154 7e-38
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 121 6e-28
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 109 1e-24
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 31 1.1
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 30 1.4
12_01_0941 - 9316051-9316056,9316747-9317082 30 1.9
12_01_0937 - 9289999-9290046,9290123-9290458 30 1.9
04_01_0279 + 3743025-3745169 29 2.4
12_01_0947 - 9396320-9396483,9396822-9397025,9397769-9398009,939... 29 3.2
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 29 3.2
07_03_1666 + 28482262-28482385,28482475-28482992 29 4.3
09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323... 28 5.6
03_03_0278 - 16126803-16129049 28 5.6
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 28 7.5
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 27 9.9
02_02_0237 - 8150491-8151066 27 9.9
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 27 9.9
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 188 bits (458), Expect = 3e-48
Identities = 88/132 (66%), Positives = 101/132 (76%)
Frame = +2
Query: 257 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 436
+L +NG K+ + S+RDP IPWG GAEYVV S+GVFTTT+KASAHL+GGAKKV+ISAPS
Sbjct: 202 TLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPS 261
Query: 437 ADAPMFVVGVNLXAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXX 616
ADAPMFVVGVN +YDP V+SNASCTTNCLAPLAKV+H+ F IVEGLM
Sbjct: 262 ADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHATTATQ 321
Query: 617 XXXDGPSGKLWR 652
DGPS K WR
Sbjct: 322 KTVDGPSMKDWR 333
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 249
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG FKGS++V
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 250 D 252
D
Sbjct: 199 D 199
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 185 bits (450), Expect = 3e-47
Identities = 87/132 (65%), Positives = 101/132 (76%)
Frame = +2
Query: 257 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 436
+L +NG KI+V S+RDP IPWG GAEYVV S+GVFTTT+KASAHL+GGA+KV+ISAPS
Sbjct: 143 TLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPS 202
Query: 437 ADAPMFVVGVNLXAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXX 616
ADAPMFVVGVN Y+PS V+SNASCTTNCLAPLAK++H+ F I EGLM
Sbjct: 203 ADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQ 262
Query: 617 XXXDGPSGKLWR 652
DGPS K WR
Sbjct: 263 KTVDGPSMKDWR 274
Score = 87.4 bits (207), Expect = 9e-18
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Frame = +1
Query: 73 SKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 249
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+FKYDSTHG FKG+++V
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 250 D 252
D
Sbjct: 140 D 140
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 172 bits (418), Expect = 2e-43
Identities = 82/132 (62%), Positives = 95/132 (71%)
Frame = +2
Query: 257 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 436
+LL ++ VF R+P+ IPWG+ GAE+VV STGVFT DKA+AHL+GGAKKV+ISAPS
Sbjct: 116 TLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPS 175
Query: 437 ADAPMFVVGVNLXAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXX 616
DAPMFVVGVN Y P ++SNASCTTNCLAPLAKVI+D F IVEGLM
Sbjct: 176 KDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQ 235
Query: 617 XXXDGPSGKLWR 652
DGPS K WR
Sbjct: 236 KTVDGPSSKDWR 247
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 76 KIGINGFGRIGRLVLRASIEK-GAQVVAINDPFIGLDYMVYLF 201
KIGINGFGRIGRLV R +++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +1
Query: 187 MVYLFKYDSTHGRFK-GSVEVQD 252
+ Y+FKYD+ HG++K V+V+D
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKD 113
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 165 bits (402), Expect = 2e-41
Identities = 78/119 (65%), Positives = 87/119 (73%)
Frame = +2
Query: 296 ERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLX 475
ER+P IPW +AGAEYVV STGVFT +KA+AHL+GGAKKV+ISAPS DAPMFV GVN
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 476 AYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDGPSGKLWR 652
Y ++SNASCTTNCLAPLAKVIHDNF I+EGLM DGPS K WR
Sbjct: 164 KYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWR 222
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 KIGINGFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQ 249
KIGINGFGRIGRLV R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K S ++++
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 250 D 252
D
Sbjct: 65 D 65
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 154 bits (373), Expect = 7e-38
Identities = 82/146 (56%), Positives = 94/146 (64%), Gaps = 14/146 (9%)
Frame = +2
Query: 257 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHL------------- 397
+L+ ++AVF R+P+ IPW AGAEYVV STGVFT DKA+AHL
Sbjct: 73 TLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFH 132
Query: 398 -EGGAKKVIISAPSADAPMFVVGVNLXAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIV 574
+GGAKKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLAPLAKVI+D F IV
Sbjct: 133 MQGGAKKVVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIV 192
Query: 575 EGLMXXXXXXXXXXXXXDGPSGKLWR 652
EGLM DGPS K WR
Sbjct: 193 EGLMTTVHAITATQKTVDGPSMKDWR 218
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/56 (53%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +1
Query: 91 GFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK-GSVEVQD 252
GFGRIGRLV R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKD 70
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 121 bits (291), Expect = 6e-28
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +2
Query: 254 DSLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAP 433
+++ V+G I V S+R+P +PWG+ G + V+ TGVF D A H++ GAKKV+I+AP
Sbjct: 131 NAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAP 190
Query: 434 S-ADAPMFVVGVNLXAYDPSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLM 586
D P +VVGVN Y P +ISNASCTTNCLAP K++ F I++G M
Sbjct: 191 GKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTM 242
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 76 KIGINGFGRIGRLVLRASIEKG----AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE 243
K+ INGFGRIGR LR +G V+AIND G+ +L KYDST G F V+
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 109 bits (263), Expect = 1e-24
Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
Frame = +2
Query: 257 SLLVNGNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDKASAHLEGGAKKVIISAPS 436
++ V+G I V S RDP +PW + G + V+ TGVF A H++ GAKKVII+AP+
Sbjct: 142 TISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 201
Query: 437 --ADAPMFVVGVNLXAYDPSF-KVISNASCTTNCLAPLAKVIHDNFEIVEGLM 586
AD P +V+GVN Y +ISNASCTTNCLAP K++ + F IV+G M
Sbjct: 202 KGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTM 254
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 61 ADNMSKIGINGFGRIGRLVLRASIEK---GAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 231
A+ K+ INGFGRIGR LR E+ +VV +ND G+ +L KYDS G FK
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFK 132
Query: 232 GSVEVQD 252
V++ D
Sbjct: 133 ADVKIVD 139
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 272 GNKIAVFSERDPKAIPWGKAGAEYVVXSTGVFTTTDK 382
GNK+ D + + WGK E + G+ T+T+K
Sbjct: 445 GNKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 85 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 255
+ G G IGR ++ AS+ +G + P IGLD + L + + R + S++ DG
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQILLAFKAQGARLLEASLDDHDG 68
Query: 256 FLAC*R 273
+A R
Sbjct: 69 LVAAVR 74
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 85 INGFGRIGRLVLRASIEKGAQVVAINDPFIGL--DYMVYLFKYDSTHGR-FKGSVEVQDG 255
+ G G IGR ++ AS+ +G + P IGL D + L + + R + S++ DG
Sbjct: 11 VGGSGYIGRRIVAASLAEGHPTFVLLRPEIGLNIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 256 FLAC*R 273
+A R
Sbjct: 71 LVAAVR 76
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 85 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 255
+ G G IGR ++ AS+ G + P IGLD + L + + R + S++ DG
Sbjct: 11 VGGTGHIGRRIVAASLAAGHPTSVLLRPEIGLDIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 256 FLAC*R 273
+A R
Sbjct: 71 LVAAIR 76
>04_01_0279 + 3743025-3745169
Length = 714
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 116 CSVLLLKRELKWSL*MTLSSVLTIWFIFS-SMIPPMAVLRAVLRFRMDSLLVNGNKIAV 289
C V+ ++ L + + T ++V+ WF F+ ++ P+AV A+ FR++ L + +I V
Sbjct: 240 CRVVEMELSLMYDILYTKAAVMHTWFGFAIRVVSPLAVAAALGLFRLEDDLGSYRQIDV 298
>12_01_0947 -
9396320-9396483,9396822-9397025,9397769-9398009,
9399052-9399387
Length = 314
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 85 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLDY--MVYLFKYDSTHGR-FKGSVEVQDG 255
+ G G +GR V+ AS+ G + P IGLD + L + + R + S++ DG
Sbjct: 11 VGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDG 70
Query: 256 FLAC*R 273
+A R
Sbjct: 71 LVAAVR 76
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 85 INGFGRIGRLVLRASIEKGAQVVAIND 165
I GFG +G R EKG +V+A+ D
Sbjct: 211 IQGFGNVGSWAARIIHEKGGKVIALGD 237
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 468 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDXTTYSAPAFPHG 316
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>09_03_0125 -
12531409-12531442,12531577-12531668,12531747-12532337,
12532454-12532789,12532899-12533156,12533867-12533971,
12534625-12534702,12535464-12535542,12535649-12535723,
12535828-12535946,12536042-12537106
Length = 943
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -3
Query: 462 PTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDXTTYSAPAFPHGMALGSLSEKTA 283
PTT AS + + T APP + L TP +T PH + L + A
Sbjct: 21 PTTG-AASLVSSSPSTSTAPPPRKKPRLPAAALTPTPRSTAPFAPIPHRVLLAGVLSLPA 79
Query: 282 ILLPLTSKESILNLN 238
P+ + L+L+
Sbjct: 80 SGSPVACRSHCLSLS 94
>03_03_0278 - 16126803-16129049
Length = 748
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 499 HLKCFLHHKLSCPTCK 546
+LK +L+H L CPTC+
Sbjct: 220 YLKVYLNHNLLCPTCR 235
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 577 LNNFKVIMNNLCKWGKTVCGARSI*DDL 494
LN +++L + G T CGARSI DD+
Sbjct: 426 LNENATGVHDLYRGGATACGARSIWDDM 453
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 468 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPV 355
L TT G + +GA + F++ PSK SVVV V
Sbjct: 330 LIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
>02_02_0237 - 8150491-8151066
Length = 191
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 619 FLCSSCGMNSSHQALNNFKVIMNNLCKWGKTVCGARS 509
++C SCG + SH L + + + C+ K AR+
Sbjct: 139 YMCVSCGQHDSHTQLVGYPDVRSQSCRVIKPTAFARN 175
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 506 NASCTTNCLAPLAKVIHDNFEIV 574
N SCT NC A + V HD IV
Sbjct: 899 NHSCTPNCYARIMSVGHDESRIV 921
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,484,558
Number of Sequences: 37544
Number of extensions: 391466
Number of successful extensions: 978
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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