Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H04
(610 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7BB3 Cluster: PREDICTED: similar to Eukaryotic... 267 1e-70
UniRef50_P05198 Cluster: Eukaryotic translation initiation facto... 214 1e-54
UniRef50_Q6CG42 Cluster: Yarrowia lipolytica chromosome B of str... 165 5e-40
UniRef50_Q55AH4 Cluster: Eukaryotic translation initiation facto... 156 3e-37
UniRef50_Q9FE78 Cluster: Eukaryotic translation initiation facto... 154 1e-36
UniRef50_Q01ER7 Cluster: Eif2a Eukaryotic translation initiation... 146 4e-34
UniRef50_Q5CXR0 Cluster: Translation initiation factor 2, alpha ... 144 1e-33
UniRef50_Q22US0 Cluster: Eukaryotic translation initiation facto... 118 1e-25
UniRef50_A0EDJ3 Cluster: Chromosome undetermined scaffold_90, wh... 104 1e-21
UniRef50_Q5AAU6 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_UPI000049A157 Cluster: eukaryotic translation initiatio... 95 9e-19
UniRef50_Q9NKJ7 Cluster: Elongation initiation factor 2 alpha su... 92 8e-18
UniRef50_A2E7K3 Cluster: Eukaryotic translation initiation facto... 77 4e-13
UniRef50_Q8SQW4 Cluster: TRANSLATION INITIATION FACTOR 2 ALPHA S... 75 1e-12
UniRef50_Q7R5Z9 Cluster: GLP_81_61582_62586; n=1; Giardia lambli... 74 2e-12
UniRef50_A3HAJ9 Cluster: Translation initiation factor 2, alpha ... 71 2e-11
UniRef50_Q9AW91 Cluster: Translational initiation factor 2 alpha... 66 8e-10
UniRef50_Q9WPZ5 Cluster: EIF-2 alpha homolog; n=11; Ranavirus|Re... 62 1e-08
UniRef50_Q8U1R5 Cluster: Translation initiation factor 2 subunit... 57 4e-07
UniRef50_Q97Z79 Cluster: Translation initiation factor 2 subunit... 56 5e-07
UniRef50_A7DQN6 Cluster: RNA binding S1 domain protein; n=1; Can... 54 3e-06
UniRef50_A1RXW4 Cluster: Translation initiation factor 2, alpha ... 54 3e-06
UniRef50_UPI00015BB03A Cluster: translation initiation factor 2 ... 51 2e-05
UniRef50_Q8TSZ9 Cluster: Translation initiation factor 2, subuni... 50 4e-05
UniRef50_Q8ZTY5 Cluster: Translation initiation factor 2 subunit... 47 3e-04
UniRef50_Q6LWK2 Cluster: Translation initiation factor aIF-2, su... 46 5e-04
UniRef50_Q6L212 Cluster: Protein translation initiation factor 2... 46 7e-04
UniRef50_Q9YF02 Cluster: Translation initiation factor 2 subunit... 45 0.001
UniRef50_O29723 Cluster: Translation initiation factor 2 subunit... 42 0.011
UniRef50_A3DDC0 Cluster: Hydroxymethylbutenyl pyrophosphate redu... 42 0.015
UniRef50_A3CX77 Cluster: Translation initiation factor 2, alpha ... 41 0.026
UniRef50_Q191X6 Cluster: Hydroxymethylbutenyl pyrophosphate redu... 40 0.035
UniRef50_Q97BP2 Cluster: Translation initiation factor 2 subunit... 40 0.046
UniRef50_A7I9Q5 Cluster: Translation initiation factor 2, alpha ... 39 0.081
UniRef50_Q67NT8 Cluster: 30S ribosomal protein S1; n=1; Symbioba... 38 0.14
UniRef50_P18378 Cluster: Protein K3; n=25; Orthopoxvirus|Rep: Pr... 38 0.14
UniRef50_A4M7V7 Cluster: RNA binding S1 domain protein; n=1; Pet... 38 0.19
UniRef50_Q74ME8 Cluster: NEQ405; n=1; Nanoarchaeum equitans|Rep:... 36 0.57
UniRef50_O27363 Cluster: Translation initiation factor 2 subunit... 36 0.57
UniRef50_Q7X2Y7 Cluster: Putative 30S ribosomal protein S1; n=1;... 36 0.75
UniRef50_A6NUQ8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.99
UniRef50_A5DUA4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q6MP05 Cluster: 30S ribosomal protein S1; n=23; Bacteri... 34 3.0
UniRef50_O51153 Cluster: Ribosomal protein S1; n=3; Borrelia bur... 34 3.0
UniRef50_A3E3T2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q2S1M7 Cluster: Ribosomal protein S1, putative; n=1; Sa... 33 4.0
UniRef50_A7H9F8 Cluster: Polyribonucleotide nucleotidyltransfera... 33 4.0
UniRef50_Q01DB7 Cluster: Predicted RNA-binding polyribonucleotid... 33 4.0
UniRef50_Q9Z8M3 Cluster: 30S ribosomal protein S1; n=10; Chlamyd... 33 4.0
UniRef50_Q8KFN4 Cluster: Ribosomal protein S1; n=11; Chlorobiace... 33 5.3
UniRef50_A5IME0 Cluster: RNA binding S1 domain protein; n=2; The... 33 5.3
UniRef50_A5IDX9 Cluster: Sensor protein; n=2; Legionella pneumop... 33 5.3
UniRef50_A5CF24 Cluster: 30S ribosomal protein S1; n=1; Orientia... 33 5.3
UniRef50_Q4P4Z0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_O83303 Cluster: Ribosomal protein S1; n=2; Treponema|Re... 33 7.0
UniRef50_Q9LK47 Cluster: Similarity to 30s ribosomal protein s1;... 33 7.0
UniRef50_Q08FY0 Cluster: EIF2a-like PKR inhibitor; n=9; Poxvirid... 32 9.3
UniRef50_Q4J3W5 Cluster: GGDEF; n=1; Azotobacter vinelandii AvOP... 32 9.3
UniRef50_A7FQJ6 Cluster: RNA-binding protein; n=4; Clostridium b... 32 9.3
UniRef50_A3ZTD7 Cluster: 30S ribosomal protein S1; n=2; Bacteria... 32 9.3
>UniRef50_UPI0000DB7BB3 Cluster: PREDICTED: similar to Eukaryotic
translation initiation factor 2 subunit alpha
(eIF-2-alpha); n=1; Apis mellifera|Rep: PREDICTED:
similar to Eukaryotic translation initiation factor 2
subunit alpha (eIF-2-alpha) - Apis mellifera
Length = 303
Score = 267 bits (655), Expect = 1e-70
Identities = 130/164 (79%), Positives = 140/164 (85%), Gaps = 1/164 (0%)
Frame = +3
Query: 99 MPLSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNK 278
M LSCRFY+EKYPEVEDVVMVNVRSIAEMGAYVHLL YNNIEGM NK
Sbjct: 1 MVLSCRFYKEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK 60
Query: 279 LIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHY 458
LIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAED+ KCTERYAKAKAVNSILRHVA LLHY
Sbjct: 61 LIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDVEKCTERYAKAKAVNSILRHVAELLHY 120
Query: 459 ETSEQLEELYKKTAWYFEXKYXK-KASAYDFFKQAAVDPSVLDE 587
++ +QLEELY+KTAW+FE KY K KASAYDFFKQ+ +DPS+L E
Sbjct: 121 DSDDQLEELYQKTAWHFEEKYKKQKASAYDFFKQSVLDPSILAE 164
>UniRef50_P05198 Cluster: Eukaryotic translation initiation factor 2
subunit 1; n=68; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 2 subunit 1 - Homo sapiens
(Human)
Length = 315
Score = 214 bits (523), Expect = 1e-54
Identities = 107/170 (62%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
Frame = +3
Query: 99 MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXN 275
MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LL YNNIEGM N
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
KLIR+G+ E VVVIRVDKEKGYIDLSKRRVS E+ KC +++ K+K V SILRHVA +L
Sbjct: 61 KLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLE 120
Query: 456 YETSEQLEELYKKTAWYFEXKYXKKA-SAYDFFKQAAVDPSVLDECGLHE 602
Y EQLE L+++TAW F+ KY + AYD FK A DPS+LD L+E
Sbjct: 121 YTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNE 170
>UniRef50_Q6CG42 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=5; Ascomycota|Rep:
Yarrowia lipolytica chromosome B of strain CLIB122 of
Yarrowia lipolytica - Yarrowia lipolytica (Candida
lipolytica)
Length = 313
Score = 165 bits (402), Expect = 5e-40
Identities = 85/155 (54%), Positives = 104/155 (67%)
Frame = +3
Query: 108 SCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIR 287
+CRFY KYPEV+D+VMVNV+ IA+MGAYV LL Y++IEGM K I+
Sbjct: 8 TCRFYANKYPEVDDLVMVNVKEIADMGAYVKLLEYDDIEGMILLSELSRRRIRSIQKHIK 67
Query: 288 VGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETS 467
VGK E VVV+RVDK+KGYIDLSKRRVSAED+ KC E+Y K+K V+SILRHVA Y
Sbjct: 68 VGKNEIVVVLRVDKDKGYIDLSKRRVSAEDVEKCEEKYTKSKTVHSILRHVAEKHKY--- 124
Query: 468 EQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDP 572
LE+LY++ W KY AYD FK + +P
Sbjct: 125 -SLEKLYEQVGWPLSTKY---GHAYDGFKLSITNP 155
>UniRef50_Q55AH4 Cluster: Eukaryotic translation initiation factor 2
alpha; n=2; Dictyostelium discoideum|Rep: Eukaryotic
translation initiation factor 2 alpha - Dictyostelium
discoideum AX4
Length = 341
Score = 156 bits (379), Expect = 3e-37
Identities = 79/159 (49%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Frame = +3
Query: 111 CRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRV 290
CR Y++KYPE ++VMV + SI +MG YV LL YNNIEGM NKL+RV
Sbjct: 7 CRMYEKKYPEENELVMVRIESIGDMGVYVSLLEYNNIEGMILLSEISRRRIRSINKLVRV 66
Query: 291 GKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETS- 467
GKTE VVV+RVDK+KGYIDLSKRRV+ E+ +C ER+ K+KAV+ I+R+VA L E +
Sbjct: 67 GKTEAVVVVRVDKDKGYIDLSKRRVTPEEYAQCEERFHKSKAVHGIVRYVATKLSTEDNV 126
Query: 468 EQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLD 584
+ + LY K W Y K AY+ FK + +PSV +
Sbjct: 127 VKTKHLYTKFVWPL---YTKYGHAYEAFKLSITEPSVFN 162
>UniRef50_Q9FE78 Cluster: Eukaryotic translation initiation factor 2
alpha subunit-like protein; n=16; Eukaryota|Rep:
Eukaryotic translation initiation factor 2 alpha
subunit-like protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 344
Score = 154 bits (374), Expect = 1e-36
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Frame = +3
Query: 105 LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLI 284
L CR Y+ +YP+V+ VM+ V++IA+MGAYV LL YNNIEGM + LI
Sbjct: 8 LECRMYESRYPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRIRSISSLI 67
Query: 285 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYET 464
+VG+TEPV+V+RVD+E+GYIDLSKRRVS ED C ERY K+K V+SI+RHVA + +
Sbjct: 68 KVGRTEPVMVLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVAETVGVD- 126
Query: 465 SEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDP-SVLD 584
LEELY W Y K A++ FK DP SV D
Sbjct: 127 ---LEELYVNIGWPL---YKKHGHAFEAFKIVVTDPDSVFD 161
>UniRef50_Q01ER7 Cluster: Eif2a Eukaryotic translation initiation
factor 2, alpha subunit; n=1; Ostreococcus tauri|Rep:
Eif2a Eukaryotic translation initiation factor 2, alpha
subunit - Ostreococcus tauri
Length = 311
Score = 146 bits (354), Expect = 4e-34
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 7/161 (4%)
Frame = +3
Query: 120 YQEKYPEVEDVVMVNV------RSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKL 281
Y E++P+++ VVMV V +SIAEMGAYV LL Y+NIEGM +KL
Sbjct: 2 YSERFPDIDQVVMVQVQNPAQVKSIAEMGAYVQLLEYDNIEGMILLSELTRRRIRSVSKL 61
Query: 282 IRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYE 461
I+VG+ EPV+V+RVD EKGYIDLSKRRVS EDI C +Y K+K V+SI+RHV+ E
Sbjct: 62 IKVGRIEPVMVLRVDDEKGYIDLSKRRVSPEDIEACEIKYNKSKVVHSIIRHVS-----E 116
Query: 462 TSEQL-EELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVL 581
T+ L E+LYK W F Y K A+D FK DPS+L
Sbjct: 117 TTGTLPEQLYKSFGWPF---YSKYGHAFDAFKMFVTDPSLL 154
>UniRef50_Q5CXR0 Cluster: Translation initiation factor 2, alpha
subunit(EIF2-alpha); S1-like RNA binding domain; n=11;
Apicomplexa|Rep: Translation initiation factor 2, alpha
subunit(EIF2-alpha); S1-like RNA binding domain -
Cryptosporidium parvum Iowa II
Length = 355
Score = 144 bits (349), Expect = 1e-33
Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Frame = +3
Query: 105 LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLI 284
+ CRFY+ K+PE E+ VM V+ I E+GA+V LL YN+IEGM NKL
Sbjct: 29 VDCRFYENKFPEPEEFVMARVKRITEVGAFVSLLEYNDIEGMILMSELSKRRIRSVNKLT 88
Query: 285 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYET 464
RVG+ E VVV+RVDK KGYIDLSKRRV+ ED+ +C E+Y+K K V +RH+A +
Sbjct: 89 RVGRLEVVVVLRVDKNKGYIDLSKRRVNPEDVERCEEKYSKMKKVYQTVRHIA----QKE 144
Query: 465 SEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDP-SVLDECGL 596
+EEL +K W KY A D K+AAV+P +VL E L
Sbjct: 145 GISVEELSEKLIWPLHRKY---GHALDALKEAAVNPEAVLGEFDL 186
>UniRef50_Q22US0 Cluster: Eukaryotic translation initiation factor 2
alpha subunit family protein; n=1; Tetrahymena
thermophila SB210|Rep: Eukaryotic translation initiation
factor 2 alpha subunit family protein - Tetrahymena
thermophila SB210
Length = 320
Score = 118 bits (283), Expect = 1e-25
Identities = 62/156 (39%), Positives = 90/156 (57%)
Frame = +3
Query: 114 RFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVG 293
RFY++KYP+ D+V+V V + E YV LL YN IEGM K++++G
Sbjct: 12 RFYEQKYPKENDLVVVEVVKVEENCCYVQLLEYNRIEGMITPNEMTKQMQQSIQKVLKIG 71
Query: 294 KTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQ 473
K E V V+RVD+EKGYIDLSK++V C +R++KAK ++SIL V L + S +
Sbjct: 72 KQEVVQVLRVDEEKGYIDLSKKKVRNNQDNACLDRFSKAKDIHSILITVCESLPQDCSVK 131
Query: 474 LEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVL 581
+++LY K W Y AYD F+ A D +++
Sbjct: 132 IDDLYTKIVWPL---YKLFNHAYDAFRFALNDETII 164
>UniRef50_A0EDJ3 Cluster: Chromosome undetermined scaffold_90, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_90,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 320
Score = 104 bits (250), Expect = 1e-21
Identities = 54/166 (32%), Positives = 91/166 (54%)
Frame = +3
Query: 105 LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLI 284
L CRFY+ +YP+ D+V+V V + E +YV LL Y+ I GM K +
Sbjct: 15 LRCRFYENQYPKENDLVVVEVVEVQENASYVELLEYDRIRGMIPPNETTRALRGGIQKAL 74
Query: 285 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYET 464
++GK + V V+RVD+++GYIDLSK++V+ ++ +++A K ++SI+R +A +
Sbjct: 75 KIGKIQVVRVLRVDEDQGYIDLSKKKVAKDEEQASQQKFADGKMIHSIMRAIAE----KC 130
Query: 465 SEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDECGLHE 602
+ +++LYK W + + + S FK A D L + L E
Sbjct: 131 NMNVQQLYKTIVWPLQ-ENKQNVSVLQIFKNALSDQKHLSKLNLSE 175
>UniRef50_Q5AAU6 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 121
Score = 100 bits (239), Expect = 3e-20
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = -1
Query: 442 ATCRRIEFTAFAFA*RSVHLYISSADTRRFDKSMYPFSLSTLITTTGSVFPTRINLLMDL 263
A C ++E+TAF S H ISSA+T DKSMYPFSLSTL TT S PTRIN ++
Sbjct: 15 AQCLKMEWTAFDLLYLSSHFTISSAETTFLDKSMYPFSLSTLNTTATSFLPTRINFWIER 74
Query: 262 IRLLESSDSKIMPSILLYXRRWTYAPISAM 173
IRLL++SD+ +PSIL Y +TYAPISA+
Sbjct: 75 IRLLDNSDNNTIPSILSYSNNFTYAPISAI 104
>UniRef50_UPI000049A157 Cluster: eukaryotic translation initiation
factor 2 alpha subunit, putative; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: eukaryotic translation
initiation factor 2 alpha subunit, putative - Entamoeba
histolytica HM-1:IMSS
Length = 299
Score = 95.5 bits (227), Expect = 9e-19
Identities = 55/164 (33%), Positives = 85/164 (51%)
Frame = +3
Query: 105 LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLI 284
L CR ++K+P +D+ +V V S +EMG YV L Y++I+GM +L
Sbjct: 11 LHCRMLEQKFPNEDDLCLVTVVSSSEMGTYVALKEYDDIQGMIPMSELSRKRYKQT-RLT 69
Query: 285 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYET 464
RVGK E VIRV+ E G+IDLS +R + E+ +Y K K + I+R +A +
Sbjct: 70 RVGKEEVATVIRVNSESGFIDLSLKRTTPEEKSAFLTKYTKNKEAHLIMRLIAK----KA 125
Query: 465 SEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDECGL 596
+EELY W KY + +D F+++ +P V + G+
Sbjct: 126 DVSMEELYTMFGWPLAKKY---GTLHDAFRKSLTEPDVFEPYGI 166
>UniRef50_Q9NKJ7 Cluster: Elongation initiation factor 2 alpha
subunit, putative; n=7; Trypanosomatidae|Rep: Elongation
initiation factor 2 alpha subunit, putative - Leishmania
major
Length = 432
Score = 92.3 bits (219), Expect = 8e-18
Identities = 46/121 (38%), Positives = 64/121 (52%)
Frame = +3
Query: 117 FYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGK 296
FY E P++ DVV V + + + A V LL Y EG+ KLI+VG+
Sbjct: 141 FYVETMPKINDVVWVKITQVNDTSAVVQLLEYGKREGIIPYTEVTRRRVRSMGKLIKVGR 200
Query: 297 TEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQL 476
TEP VIR+DK+KGYIDLSK+ V+ + C + + V SI+ HVA L + +
Sbjct: 201 TEPAQVIRIDKDKGYIDLSKKLVTPNEAKACEAHFRQGNEVRSIVCHVAELCDIPAMDAM 260
Query: 477 E 479
E
Sbjct: 261 E 261
>UniRef50_A2E7K3 Cluster: Eukaryotic translation initiation factor 2
alpha subunit family protein; n=1; Trichomonas vaginalis
G3|Rep: Eukaryotic translation initiation factor 2 alpha
subunit family protein - Trichomonas vaginalis G3
Length = 306
Score = 76.6 bits (180), Expect = 4e-13
Identities = 49/160 (30%), Positives = 76/160 (47%)
Frame = +3
Query: 108 SCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIR 287
S +Y P D VMV + + E+G +V LL Y+N EGM K IR
Sbjct: 8 SVNWYPNDLPNPSDKVMVKITRVDELGIWVQLLEYSNREGMIPLGQFTTRKSRKVPKTIR 67
Query: 288 VGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETS 467
VGK + +V VD EKG +DL+++ + E+I +RY K + ++L + +
Sbjct: 68 VGKVDTAMVTTVDVEKGNMDLTRQGLKEEEIAANEKRYNDYKNLMNLLAFAST----QCK 123
Query: 468 EQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDE 587
LEEL + A +Y +AY +Q+ P +LD+
Sbjct: 124 VPLEELVQTIAHPLTKEY---GNAYQALQQSNTKPEILDD 160
>UniRef50_Q8SQW4 Cluster: TRANSLATION INITIATION FACTOR 2 ALPHA
SUBUNIT; n=1; Encephalitozoon cuniculi|Rep: TRANSLATION
INITIATION FACTOR 2 ALPHA SUBUNIT - Encephalitozoon
cuniculi
Length = 283
Score = 74.9 bits (176), Expect = 1e-12
Identities = 47/159 (29%), Positives = 78/159 (49%)
Frame = +3
Query: 111 CRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRV 290
CR + KYP ++V+ V SI G ++LL Y ++EG+ ++ +V
Sbjct: 6 CRLHSRKYPREGEIVIGRVVSIGGEGLTLNLLEYGDLEGLVLLGELSKRRVRSIQQVTKV 65
Query: 291 GKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSE 470
G E V++VD+ +GYIDLS +V+ + +C E AK K I+ A L E S
Sbjct: 66 GNIEICNVLKVDEGRGYIDLSMSKVTENEKSECRETSAKNKLAYHIMVKAAKRLGMEVS- 124
Query: 471 QLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDE 587
ELY++ + E ++ S Y FF + + ++D+
Sbjct: 125 ---ELYERMGYDKEEEF---GSLYYFFARVKDNGDIMDD 157
>UniRef50_Q7R5Z9 Cluster: GLP_81_61582_62586; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_61582_62586 - Giardia lamblia
ATCC 50803
Length = 334
Score = 74.1 bits (174), Expect = 2e-12
Identities = 41/150 (27%), Positives = 71/150 (47%)
Frame = +3
Query: 111 CRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRV 290
CR ++ P V+ V ++G Y+HLL +NN E + N +R
Sbjct: 10 CRMHESPVPAQHQYVLCRVDRSHDIGFYIHLLEWNNTEALLPASSIAQRRIKNINSYLRP 69
Query: 291 GKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSE 470
G+ + V R+D ++GYIDL +R V+ +D C + + +++++RH+A L
Sbjct: 70 GQEITLEVARIDVDRGYIDLDERSVTPQDKEDCKMEFYRNNTIHTLMRHLALLFKI---P 126
Query: 471 QLEELYKKTAWYFEXKYXKKASAYDFFKQA 560
+L LYK W ++ S Y+ F+ A
Sbjct: 127 KLIILYKVLGWP-TAALDEEQSVYNAFRCA 155
>UniRef50_A3HAJ9 Cluster: Translation initiation factor 2, alpha
subunit; n=1; Caldivirga maquilingensis IC-167|Rep:
Translation initiation factor 2, alpha subunit -
Caldivirga maquilingensis IC-167
Length = 277
Score = 71.3 bits (167), Expect = 2e-11
Identities = 49/165 (29%), Positives = 77/165 (46%)
Frame = +3
Query: 84 K*THKMPLSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXX 263
K T +MP+ RFY+++YP+V ++V+ V+SI E GAY+ L Y +E
Sbjct: 6 KKTTQMPV-VRFYRKQYPDVGELVVGTVKSIEEHGAYITLDEYGGVEAYVPINEVLQSWF 64
Query: 264 XXXNKLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVA 443
++VG VIRVD +G IDLS RRV E+ ER A N +
Sbjct: 65 RNIRDYLKVGSKAVFKVIRVDPRRGLIDLSLRRVRDEE----RERKFNAWKRNLKAIKLM 120
Query: 444 XLLHYETSEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSV 578
++ + L +L ++ W Y SA++ + +DP +
Sbjct: 121 EIIAQKMGVSLSKLMEEAGWSIMEYYGDLYSAFEDAAKGNIDPLI 165
>UniRef50_Q9AW91 Cluster: Translational initiation factor 2 alpha
SU; n=1; Guillardia theta|Rep: Translational initiation
factor 2 alpha SU - Guillardia theta (Cryptomonas phi)
Length = 264
Score = 65.7 bits (153), Expect = 8e-10
Identities = 39/148 (26%), Positives = 65/148 (43%)
Frame = +3
Query: 99 MPLSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNK 278
M R Y+ P V ++V VR I G+YV L Y NIE M K
Sbjct: 1 MKFYLRLYENIVPSVGEIVQGLVREIKSFGSYVELYEYGNIESMLLFSEISRKKIKFIKK 60
Query: 279 LIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHY 458
++ G E +VVIR EKGYID+SK++++ ++ + + + S+L + +
Sbjct: 61 FVKEGNKEILVVIRTFPEKGYIDVSKKQITQNEMNSMSYKSNFNRIFLSLLNDLKRI--- 117
Query: 459 ETSEQLEELYKKTAWYFEXKYXKKASAY 542
+E+ + +W K+ S +
Sbjct: 118 -KKLSIEDFNIRLSWIISRKFNHPTSGF 144
>UniRef50_Q9WPZ5 Cluster: EIF-2 alpha homolog; n=11; Ranavirus|Rep:
EIF-2 alpha homolog - Ictalurus melas ranavirus
Length = 259
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 114 RFYQEKYPEVEDVVMVNVRSIAEM---GAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLI 284
RFY E P DV M V + ++ G YV ++ Y N+EG + +
Sbjct: 5 RFYSEILPRQGDVTMCRVLAHSDSWDEGVYVSMMEYGNVEGYVAIGVYNHRDIRKRFRKL 64
Query: 285 RVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVA 443
+ V+RVD+EKGY+DL R V+A+ Y+C RY + ++ A
Sbjct: 65 CPSAEMCMTVLRVDREKGYVDLDDRAVNADQAYECCSRYQLRRTEMAVAERAA 117
>UniRef50_Q8U1R5 Cluster: Translation initiation factor 2 subunit
alpha; n=6; Euryarchaeota|Rep: Translation initiation
factor 2 subunit alpha - Pyrococcus furiosus
Length = 275
Score = 56.8 bits (131), Expect = 4e-07
Identities = 33/120 (27%), Positives = 57/120 (47%)
Frame = +3
Query: 129 KYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPV 308
+YPE ++V+ V+ + GA++ L Y EG +R G+
Sbjct: 7 EYPEEGELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKVVA 66
Query: 309 VVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEELY 488
VIRVD +KG+IDLS RRV+ + + + +A+ ++L+ A L + E E++
Sbjct: 67 KVIRVDPKKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFEEAWREVW 126
>UniRef50_Q97Z79 Cluster: Translation initiation factor 2 subunit
alpha; n=4; Sulfolobaceae|Rep: Translation initiation
factor 2 subunit alpha - Sulfolobus solfataricus
Length = 266
Score = 56.4 bits (130), Expect = 5e-07
Identities = 37/162 (22%), Positives = 78/162 (48%)
Frame = +3
Query: 117 FYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGK 296
+ + K P ++++ V+ + + G+YV L Y ++ +++ +
Sbjct: 3 YSRSKLPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENR 62
Query: 297 TEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQL 476
V VIRVD+ KG +D+S ++V+ ++ K ++ K + ++ IL V+ L + SE
Sbjct: 63 KVIVKVIRVDRRKGTVDVSLKKVTDDERRKKNLQWKKIQRLDKILELVSQKL--KLSE-- 118
Query: 477 EELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDECGLHE 602
++ +++ AW E KY +A + K +L + G+ E
Sbjct: 119 KDAWEQVAWKLEAKYGDPITAIE--KAVKEGEKILIDAGVPE 158
>UniRef50_A7DQN6 Cluster: RNA binding S1 domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: RNA
binding S1 domain protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 265
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Frame = +3
Query: 126 EKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEP 305
++ PE ++V+ V + + GAYV L Y+N++G N+ ++ G+ +
Sbjct: 6 QEMPEQGEIVLATVTKVMDHGAYVTLDEYDNLQGFLHISEIAPGWIRSVNRFVKDGEKKV 65
Query: 306 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHV--AXLLHYETSEQLE 479
++V +V+ ++G IDLS ++VS + + + K + ++L++V L E E+LE
Sbjct: 66 LLVKKVNPQRGDIDLSLKQVSKDQKKQKLKEVKKFEKGKTLLQNVQEKAKLSDEDIEKLE 125
Query: 480 E-LYKK 494
+ +Y K
Sbjct: 126 DSIYSK 131
>UniRef50_A1RXW4 Cluster: Translation initiation factor 2, alpha
subunit; n=1; Thermofilum pendens Hrk 5|Rep: Translation
initiation factor 2, alpha subunit - Thermofilum pendens
(strain Hrk 5)
Length = 265
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/133 (24%), Positives = 63/133 (47%)
Frame = +3
Query: 123 QEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTE 302
+E P + ++V+ V I + GA+V L + ++ +++VG+
Sbjct: 5 REDVPSLNELVVGTVIDIQDHGAFVSLDEFGGLKAYIPLGEVSHSWFKNIRDVLKVGRKY 64
Query: 303 PVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEE 482
+ VIRVD+ K +D+S RRVS ++ + + +A+ IL A L ++ L++
Sbjct: 65 VLKVIRVDRNKKLVDVSLRRVSEKERREKIIEWKRAQRAEKILEMAASKL----NKTLDD 120
Query: 483 LYKKTAWYFEXKY 521
Y++ W E Y
Sbjct: 121 AYREAGWKLEDHY 133
>UniRef50_UPI00015BB03A Cluster: translation initiation factor 2
subunit alpha (aeIF-2a); n=1; Ignicoccus hospitalis
KIN4/I|Rep: translation initiation factor 2 subunit
alpha (aeIF-2a) - Ignicoccus hospitalis KIN4/I
Length = 265
Score = 50.8 bits (116), Expect = 2e-05
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Frame = +3
Query: 123 QEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTE 302
+++ P V ++V+ VR + + GAYV L Y+++E ++++ +
Sbjct: 3 KKRLPRVGELVVATVREVFDYGAYVTLDEYDDLEAYLPWSEVASRWVRNIRQVLKENQKI 62
Query: 303 PVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEE 482
VIRV+K++G +DLS ++V+ + + Y + K ++L+ VA L E ++
Sbjct: 63 VCKVIRVNKKRGTVDLSLKKVTDSERKRKMYMYKRFKKGENLLKLVAEAL----GEDYDK 118
Query: 483 LYKKTAWYFEXKYXKKASAYDFFKQAAV-DPSVLDECGLHE 602
LY + + + F++AA+ VL + G+ E
Sbjct: 119 LYNMLEPHIQKHF---GDLLGVFEEAALGGEEVLTKLGIPE 156
>UniRef50_Q8TSZ9 Cluster: Translation initiation factor 2, subunit
alpha; n=7; Archaea|Rep: Translation initiation factor
2, subunit alpha - Methanosarcina acetivorans
Length = 271
Score = 50.0 bits (114), Expect = 4e-05
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +3
Query: 114 RFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVG 293
R + +PE+ + V+ V+++ + GAYV L + EG +R G
Sbjct: 3 RMGNDNWPEIGEFVVCTVKNVTDFGAYVELEEFGGREGFIHISEIKAGWVKYVRDYVREG 62
Query: 294 KTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQ 473
+ V+ VD +G+IDLS + V+ + + + L+ VA +T E
Sbjct: 63 QKIVCKVLNVDPSRGHIDLSLKDVNEHQRRAKIQEWKNEQKAAKWLQFVAE--ETKTDEN 120
Query: 474 -LEELYKKTAWYFEXKYXKKASAYDFFKQAAVD 569
L+ L++K F SAY F++AA++
Sbjct: 121 GLQALHEKLVEEF-------GSAYSAFEEAAIE 146
>UniRef50_Q8ZTY5 Cluster: Translation initiation factor 2 subunit
alpha; n=4; Pyrobaculum|Rep: Translation initiation
factor 2 subunit alpha - Pyrobaculum aerophilum
Length = 265
Score = 47.2 bits (107), Expect = 3e-04
Identities = 38/161 (23%), Positives = 68/161 (42%)
Frame = +3
Query: 114 RFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVG 293
R ++++P+V ++V+ V+ IAE GAYV+L Y ++E ++ G
Sbjct: 2 RLVKKEFPDVGELVIGTVKKIAEHGAYVYLDEY-DLEAFAPTQEIVQSWFHSIRDYVKEG 60
Query: 294 KTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQ 473
VI V+ + +++S +RV ++ K Y V +L L+ E
Sbjct: 61 NKTVFKVISVNPKMRVVEVSLKRVRVDEKEKKLLLYRHRVRVLKLLEIAMKKLNRPAEEA 120
Query: 474 LEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDECGL 596
L K WY E ++ ++ + P VLD+ L
Sbjct: 121 L-----KVMWYLEEQFGDPFKVFE--EVVKTGPHVLDDLQL 154
>UniRef50_Q6LWK2 Cluster: Translation initiation factor aIF-2,
subunit alpha; n=5; Methanococcus|Rep: Translation
initiation factor aIF-2, subunit alpha - Methanococcus
maripaludis
Length = 265
Score = 46.4 bits (105), Expect = 5e-04
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Frame = +3
Query: 132 YPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVV 311
+PE D+++ NV + GA++ LL Y EGM I+ G+
Sbjct: 5 FPEEGDIIIGNVIDVKSFGAFIELLEYPGKEGMVHISEVSSGWIKNIRDHIKKGQRVVAK 64
Query: 312 VIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEELYK 491
V+RV K IDLS +R + + + + + + +L+ + L + +EE ++
Sbjct: 65 VMRVTPHKNQIDLSLKRATDQQKKVKVQEWKRFQRAEKLLQFASEKL----GKTIEEGWE 120
Query: 492 KTAWYFEXKYXKKASAYDFFKQAAVD-PSVLDE 587
+ ++ YD F+ ++ VLDE
Sbjct: 121 AAGYPLIDEF---GELYDAFESIVIEGKEVLDE 150
>UniRef50_Q6L212 Cluster: Protein translation initiation factor 2
subunit alpha; n=2; Thermoplasmatales|Rep: Protein
translation initiation factor 2 subunit alpha -
Picrophilus torridus
Length = 251
Score = 46.0 bits (104), Expect = 7e-04
Identities = 28/116 (24%), Positives = 50/116 (43%)
Frame = +3
Query: 135 PEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVV 314
P+V D+V+V ++ I GA V L Y N+ G ++ + V
Sbjct: 5 PDVGDLVVVTIKEIKNYGAIVTLDEYENVTGFIHITEVATGWIKHIKDYLKENQKTVCKV 64
Query: 315 IRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEE 482
+ VDK + ++DLS +RV+ + E + + +L VA L + ++E
Sbjct: 65 LDVDKSRRHVDLSLKRVNEHQRREKIEEWKNEEKAFKLLEIVANNLGISKEDAMKE 120
>UniRef50_Q9YF02 Cluster: Translation initiation factor 2 subunit
alpha; n=3; Desulfurococcales|Rep: Translation
initiation factor 2 subunit alpha - Aeropyrum pernix
Length = 277
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/129 (21%), Positives = 59/129 (45%)
Frame = +3
Query: 135 PEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVV 314
P+V ++V+ V+ + + GAY+ L Y + + +++ + V V
Sbjct: 19 PDVGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKV 78
Query: 315 IRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEELYKK 494
IRV K++G +D+S +RV + + Y + +++ +A L + ++E Y++
Sbjct: 79 IRVYKKRGQVDVSLKRVMDSEKKRKMMFYKRYLKAATLVELIAEKL----GKSVDEAYRE 134
Query: 495 TAWYFEXKY 521
W E Y
Sbjct: 135 VLWKLEDAY 143
>UniRef50_O29723 Cluster: Translation initiation factor 2 subunit
alpha; n=1; Archaeoglobus fulgidus|Rep: Translation
initiation factor 2 subunit alpha - Archaeoglobus
fulgidus
Length = 267
Score = 41.9 bits (94), Expect = 0.011
Identities = 29/130 (22%), Positives = 58/130 (44%)
Frame = +3
Query: 132 YPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVV 311
YP ++V+ V+ + + GA+V L Y EGM + ++ G+
Sbjct: 13 YPSKGEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQKVICK 72
Query: 312 VIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEELYK 491
V+ V+ ++G+IDLS + V+ + +++ L + L+ + E LE++ K
Sbjct: 73 VLDVNPKRGHIDLSIKDVNERQRREKLQQWKNEMKAFKWLEIIGEKLNIDFKE-LEKIGK 131
Query: 492 KTAWYFEXKY 521
K ++ Y
Sbjct: 132 KLMKEYDSVY 141
>UniRef50_A3DDC0 Cluster: Hydroxymethylbutenyl pyrophosphate
reductase; n=3; Firmicutes|Rep: Hydroxymethylbutenyl
pyrophosphate reductase - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 694
Score = 41.5 bits (93), Expect = 0.015
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 138 EVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVI 317
EV V V+S+ + GA+V + ++G+ +++++VG V V+
Sbjct: 482 EVGKVFKGTVKSLTDFGAFVDI---GGVDGLIHISELSWTRVKHPSEVLKVGDEVEVTVL 538
Query: 318 RVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVN-SILR 434
DKEK + L R++ YK E+Y V ++LR
Sbjct: 539 EFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLR 578
Score = 34.3 bits (75), Expect = 2.3
Identities = 25/85 (29%), Positives = 35/85 (41%)
Frame = +3
Query: 123 QEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTE 302
+EKY +V DVV V V A GA+V L ++G+ + +G
Sbjct: 563 EEKY-KVGDVVKVTVLRFAPFGAFVEL--EKGVDGLVHISQISSKRLAKVEDALEIGMKV 619
Query: 303 PVVVIRVDKEKGYIDLSKRRVSAED 377
+I VD E I LS + V D
Sbjct: 620 DAKIIEVDGENKKISLSIKEVMPID 644
>UniRef50_A3CX77 Cluster: Translation initiation factor 2, alpha
subunit; n=3; Methanomicrobia|Rep: Translation
initiation factor 2, alpha subunit - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 259
Score = 40.7 bits (91), Expect = 0.026
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +3
Query: 123 QEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTE 302
+ ++PE ++V+ V + + A+V L YN G+ +R G+
Sbjct: 3 EREWPEEGELVVCTVADVKDFAAFVTLDEYNERRGLIPISEIARGWIKYIRDFVREGQKV 62
Query: 303 PVVVIRVDKEKGYIDLSKRRVS 368
V+ VD ++G+IDLS + V+
Sbjct: 63 VCKVLNVDPDRGHIDLSLKDVN 84
>UniRef50_Q191X6 Cluster: Hydroxymethylbutenyl pyrophosphate
reductase; n=2; Desulfitobacterium hafniense|Rep:
Hydroxymethylbutenyl pyrophosphate reductase -
Desulfitobacterium hafniense (strain DCB-2)
Length = 661
Score = 40.3 bits (90), Expect = 0.035
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +3
Query: 147 DVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVD 326
DVV V+ +A+ GA+V + ++G+ ++ + VG V +++VD
Sbjct: 472 DVVSGVVKRLAQFGAFVDI---GGVDGLLHVSDIAYTRIKHPSEYVNVGDEVEVQILKVD 528
Query: 327 KEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVA 443
KE+G I L +++ E+YA V + +A
Sbjct: 529 KEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIA 567
>UniRef50_Q97BP2 Cluster: Translation initiation factor 2 subunit
alpha; n=2; Thermoplasma|Rep: Translation initiation
factor 2 subunit alpha - Thermoplasma volcanium
Length = 254
Score = 39.9 bits (89), Expect = 0.046
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 135 PEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVV 314
PEV D+V+V + + GA L Y +EG +R G+ V
Sbjct: 7 PEVGDLVVVKITEVKNFGANGILEEYPGVEGYIHISEVATGWVKHIRSYLREGQRVVCKV 66
Query: 315 IRVDKEKGYIDLSKRRVS 368
I V++E+ +DLS +RV+
Sbjct: 67 INVNQERKNVDLSLKRVN 84
>UniRef50_A7I9Q5 Cluster: Translation initiation factor 2, alpha
subunit; n=1; Candidatus Methanoregula boonei 6A8|Rep:
Translation initiation factor 2, alpha subunit -
Methanoregula boonei (strain 6A8)
Length = 263
Score = 39.1 bits (87), Expect = 0.081
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +3
Query: 129 KYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPV 308
++P+ ++V+ V ++ + A+V L YN +G+ IR G+
Sbjct: 5 EWPQEAELVVCTVENVKDFVAFVSLDEYNGRQGLIPISEIATGWIKYIRDHIREGQKIVC 64
Query: 309 VVIRVDKEKGYIDLSKRRVS 368
V+ VD+ +G+IDLS + V+
Sbjct: 65 KVLNVDRTRGHIDLSLKDVN 84
>UniRef50_Q67NT8 Cluster: 30S ribosomal protein S1; n=1;
Symbiobacterium thermophilum|Rep: 30S ribosomal protein
S1 - Symbiobacterium thermophilum
Length = 441
Score = 38.3 bits (85), Expect = 0.14
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +3
Query: 147 DVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVD 326
DV+ V+SI + GA++ L ++G+ ++++ G+ V V+R+D
Sbjct: 232 DVLEGTVKSITDFGAFIDL---GGVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLRLD 288
Query: 327 KEKGYIDLSKRRVSAEDIYKCTERYAKAKAV 419
+EKG + L ++V + E+Y + V
Sbjct: 289 REKGKVSLGLKQVLPDPWDSVEEKYPEGAIV 319
>UniRef50_P18378 Cluster: Protein K3; n=25; Orthopoxvirus|Rep:
Protein K3 - Vaccinia virus (strain Western Reserve /
WR) (VACV)
Length = 88
Score = 38.3 bits (85), Expect = 0.14
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +3
Query: 135 PEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVV 314
P DV+ V + Y++L Y + E + + VGKT V V
Sbjct: 9 PNAGDVIKGRVYE-KDYALYIYLFDYPHFEAILAESVKMHMDRYVEYRDKLVGKTVKVKV 67
Query: 315 IRVDKEKGYIDLSKRRV 365
IRVD KGYID++ +R+
Sbjct: 68 IRVDYTKGYIDVNYKRM 84
>UniRef50_A4M7V7 Cluster: RNA binding S1 domain protein; n=1;
Petrotoga mobilis SJ95|Rep: RNA binding S1 domain
protein - Petrotoga mobilis SJ95
Length = 532
Score = 37.9 bits (84), Expect = 0.19
Identities = 27/105 (25%), Positives = 44/105 (41%)
Frame = +3
Query: 126 EKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEP 305
EKYP + +V V I G V + +EG+ + L+ VG
Sbjct: 261 EKYP-IGSIVQGTVTKILPFGFTVKI--DEGLEGLVHETEIFWGRKGRISDLVNVGDDVQ 317
Query: 306 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHV 440
V ++ +DKE I+LS ++VS + E+Y + V + V
Sbjct: 318 VKILNIDKENKKINLSYKQVSGDPWENIEEKYYEGNIVTGTVEKV 362
Score = 34.3 bits (75), Expect = 2.3
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Frame = +3
Query: 126 EKYPEVEDVVMVN--VRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKT 299
+ + E E+ ++++ V I GA+V L +++ G+ ++VG+
Sbjct: 172 QTFNEYEEGMVIDGVVEDIKNFGAFVRL--NDHLNGLIPASEVSWDEKISIKDYLKVGQK 229
Query: 300 EPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXL-LHYETSEQL 476
++I++D+EK I LS +R+ E+Y V + + + E L
Sbjct: 230 VKALIIKLDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEGL 289
Query: 477 EELYKKTAWYFEXK 518
E L +T ++ K
Sbjct: 290 EGLVHETEIFWGRK 303
>UniRef50_Q74ME8 Cluster: NEQ405; n=1; Nanoarchaeum equitans|Rep:
NEQ405 - Nanoarchaeum equitans
Length = 253
Score = 36.3 bits (80), Expect = 0.57
Identities = 30/100 (30%), Positives = 46/100 (46%)
Frame = +3
Query: 282 IRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYE 461
+RVG+ VIRVD I S R+ +++ + + +A N IL LL +
Sbjct: 56 VRVGQIVVGKVIRVDPLSKTIYFSLRKAHPQEVKRKLSEFRMEQAANKILE----LLANK 111
Query: 462 TSEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVL 581
+E E + KK A E K+ S Y F + A +P +L
Sbjct: 112 LNEDYEAIRKKVA---EPILKKEVSLYKAFLEIAKNPELL 148
>UniRef50_O27363 Cluster: Translation initiation factor 2 subunit
alpha; n=3; Methanobacteriaceae|Rep: Translation
initiation factor 2 subunit alpha - Methanobacterium
thermoautotrophicum
Length = 262
Score = 36.3 bits (80), Expect = 0.57
Identities = 28/155 (18%), Positives = 61/155 (39%)
Frame = +3
Query: 123 QEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTE 302
+ ++PE ++V+ V + GA+ L Y E +R +
Sbjct: 8 KNEWPEEGELVVGTVHKVLNYGAFATLEEYPGKEAFIHISEVSSGWVKNIRDFVRENQKI 67
Query: 303 PVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEE 482
V+RV+ KG++D+S +R+ + K + + + L A L + EE
Sbjct: 68 VARVLRVNPRKGHVDVSMKRIREDQRTKKIQAWKIEQKAEKFLELAARDLGKDLDTAYEE 127
Query: 483 LYKKTAWYFEXKYXKKASAYDFFKQAAVDPSVLDE 587
+ + F Y +A + +++ ++ V ++
Sbjct: 128 VGYELMDIFGDLYGAFETAAEEGEKSLIEEGVPED 162
>UniRef50_Q7X2Y7 Cluster: Putative 30S ribosomal protein S1; n=1;
uncultured Acidobacteria bacterium|Rep: Putative 30S
ribosomal protein S1 - uncultured Acidobacteria
bacterium
Length = 318
Score = 35.9 bits (79), Expect = 0.75
Identities = 25/88 (28%), Positives = 39/88 (44%)
Frame = +3
Query: 114 RFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVG 293
RF E P DVV + A GA+V L +N+EG+ ++++G
Sbjct: 134 RFLTEHKPG--DVVRGKIARFANFGAFVEL--DDNLEGLCHISELSDERVEKPEDVVQLG 189
Query: 294 KTEPVVVIRVDKEKGYIDLSKRRVSAED 377
+ ++R+D E I LS R V +D
Sbjct: 190 QEMEFKILRIDVESKKIGLSARSVGKDD 217
>UniRef50_A6NUQ8 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 649
Score = 35.5 bits (78), Expect = 0.99
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +3
Query: 165 VRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVDKEKGYI 344
V+S+ GA+V + ++GM +++++VG T V VI DKEK I
Sbjct: 485 VKSLTSYGAFVDI---GGVDGMVHISELSWSRIKHPSEVVKVGDTVEVYVISFDKEKKKI 541
Query: 345 DLSKRRVSAEDIYKCTERYAKAKAVN 422
L + S + T +Y+ N
Sbjct: 542 SLGMKDRSQDPWTVFTTKYSVGDTAN 567
>UniRef50_A5DUA4 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 823
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 291 GKTEPVVVIRVDKEKGYIDLSKRRVS--AEDIYKCTERYAKAKAVNSILR 434
GK +P ++ ++ KGYIDL+K+ ++ A I+K E + A ILR
Sbjct: 768 GKEDPEIINKISDGKGYIDLTKKDIAIPAYPIFKNAENASLAPTGKQILR 817
>UniRef50_Q6MP05 Cluster: 30S ribosomal protein S1; n=23;
Bacteria|Rep: 30S ribosomal protein S1 - Bdellovibrio
bacteriovorus
Length = 595
Score = 33.9 bits (74), Expect = 3.0
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +3
Query: 159 VNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVDKEKG 338
V V A+ GA+V L ++IEG+ + I+ G++ VI +DK+
Sbjct: 489 VKVTKTADFGAFVEL--ESDIEGLIHISELTTEKINSVEEFIKPGQSVKAEVISIDKDAR 546
Query: 339 YIDLSKRRVSAEDIYKCTERYAKAKAVNS 425
I LS + V + + Y K S
Sbjct: 547 KIGLSAKLVKLRESKADVDDYVKKATATS 575
>UniRef50_O51153 Cluster: Ribosomal protein S1; n=3; Borrelia
burgdorferi group|Rep: Ribosomal protein S1 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 553
Score = 33.9 bits (74), Expect = 3.0
Identities = 18/93 (19%), Positives = 45/93 (48%)
Frame = +3
Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
+LI++G+ V ++ +DKE I L ++++ + TE+Y + V ++ ++
Sbjct: 317 ELIKLGQIVEVKILEIDKENQKISLGIKQINENPWERLTEKYPIGRVVQGVVTNITKTGA 376
Query: 456 YETSEQLEELYKKTAWYFEXKYXKKASAYDFFK 554
+ E+ + Y F+ + ++ ++FK
Sbjct: 377 FVNIEEGIDAYVSK---FDISWLEEIDPEEYFK 406
>UniRef50_A3E3T2 Cluster: Putative uncharacterized protein; n=1;
Pfiesteria piscicida|Rep: Putative uncharacterized
protein - Pfiesteria piscicida
Length = 248
Score = 33.9 bits (74), Expect = 3.0
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 306 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQ 473
V++ RVDK G LSK S D+ K T ++ +A+ + R V + HY+ EQ
Sbjct: 169 VIMRRVDKYGG---LSKSTPSGYDLAKATMKHHIVRAIYDVPRQVKLVDHYQVDEQ 221
>UniRef50_Q2S1M7 Cluster: Ribosomal protein S1, putative; n=1;
Salinibacter ruber DSM 13855|Rep: Ribosomal protein S1,
putative - Salinibacter ruber (strain DSM 13855)
Length = 871
Score = 33.5 bits (73), Expect = 4.0
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +3
Query: 129 KYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXX-NKLIRVGKTEP 305
KY E DVV V SI GA+V + IEG+ ++++ +G+
Sbjct: 445 KYDE-GDVVEGKVVSITNYGAFVEI--EKGIEGLVHISEMSWTRHIEHPSQMVSLGQVVD 501
Query: 306 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHV 440
V ++ +D+E+ I L +++ + ++RY + +R++
Sbjct: 502 VKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTVRNI 546
>UniRef50_A7H9F8 Cluster: Polyribonucleotide nucleotidyltransferase;
n=6; Deltaproteobacteria|Rep: Polyribonucleotide
nucleotidyltransferase - Anaeromyxobacter sp. Fw109-5
Length = 722
Score = 33.5 bits (73), Expect = 4.0
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +3
Query: 138 EVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVI 317
E+ + VR IAE GA+V L + +G+ + ++ G+ V VI
Sbjct: 629 EIGKTYLGTVRKIAEFGAFVEL--FPGTDGLIHISELSDKRVKSVSDVLSEGEEVLVKVI 686
Query: 318 RVDKEKGYIDLSKRRVSAEDIYKCTERYAKAK 413
VD+ G I LS++ AE K E A+ K
Sbjct: 687 SVDR-AGKIRLSRKEALAEAAGKKPEGAAETK 717
>UniRef50_Q01DB7 Cluster: Predicted RNA-binding polyribonucleotide
nucleotidyltransferase; n=2; Ostreococcus|Rep: Predicted
RNA-binding polyribonucleotide nucleotidyltransferase -
Ostreococcus tauri
Length = 345
Score = 33.5 bits (73), Expect = 4.0
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 126 EKYP--EVEDVVMVNVRSIAEMGAYVHLL----XYNNIEGMXXXXXXXXXXXXXXNKLIR 287
EK P EV++VV V S+++ GA+V + + +EG+ ++
Sbjct: 161 EKLPAGEVKEVV---VTSLSDFGAFVEVCDGQGAASGLEGLVHISEISWNRISHPRDAVK 217
Query: 288 VGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTE 395
VG+ E V V+ V+ E G I+ S ++ A+ + + E
Sbjct: 218 VGQREFVKVLEVNGETGRINFSIKQTQADPLMETLE 253
>UniRef50_Q9Z8M3 Cluster: 30S ribosomal protein S1; n=10;
Chlamydiales|Rep: 30S ribosomal protein S1 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 580
Score = 33.5 bits (73), Expect = 4.0
Identities = 23/106 (21%), Positives = 48/106 (45%)
Frame = +3
Query: 165 VRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVDKEKGYI 344
V++I + G ++ L + I+G+ ++++ + + V+++ VDKEKG +
Sbjct: 227 VKNITDFGVFLDL---DGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDKEKGRV 283
Query: 345 DLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEE 482
L ++ ++Y K V L + LL Y ++EE
Sbjct: 284 ALGLKQKEHNPWEDIEKKYPPGKRV---LGKIVKLLPYGAFIEIEE 326
>UniRef50_Q8KFN4 Cluster: Ribosomal protein S1; n=11;
Chlorobiaceae|Rep: Ribosomal protein S1 - Chlorobium
tepidum
Length = 550
Score = 33.1 bits (72), Expect = 5.3
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +3
Query: 129 KYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXX-NKLIRVGKTEP 305
KYP V V SI + GA+V + IEG+ ++ + + +
Sbjct: 264 KYP-VGIKATGRVVSITDYGAFVEI--EKGIEGLVHISEMSWTQHIKHPSQFVSLNQEVE 320
Query: 306 VVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAK 407
VV++ +DKE + LS +RVS + +E+Y +
Sbjct: 321 VVILNIDKEHTKLSLSMKRVSEDPWIALSEKYVE 354
>UniRef50_A5IME0 Cluster: RNA binding S1 domain protein; n=2;
Thermotoga|Rep: RNA binding S1 domain protein -
Thermotoga petrophila RKU-1
Length = 543
Score = 33.1 bits (72), Expect = 5.3
Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 99 MPLSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXX-XXXXXXXN 275
MP +EKYP V VV V SI G +V L +EG+
Sbjct: 258 MPDPWEKVKEKYP-VGKVVGGEVISIHSFGFFVRL--EPGVEGLVPRSEVFWGNARKNLE 314
Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERY 401
+++ VG V VI VDKE + LS R+ + +RY
Sbjct: 315 EVVSVGDLVKVEVINVDKENRKLTLSYRKAKGDPWENIEDRY 356
>UniRef50_A5IDX9 Cluster: Sensor protein; n=2; Legionella
pneumophila|Rep: Sensor protein - Legionella pneumophila
(strain Corby)
Length = 676
Score = 33.1 bits (72), Expect = 5.3
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +3
Query: 324 DKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
D G++D R+ D+Y+C E K + ++++H+ ++H
Sbjct: 339 DVHAGFMDKEDIRIETFDLYQCIEDLVKLERPTTVMKHLELIVH 382
>UniRef50_A5CF24 Cluster: 30S ribosomal protein S1; n=1; Orientia
tsutsugamushi Boryong|Rep: 30S ribosomal protein S1 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 507
Score = 33.1 bits (72), Expect = 5.3
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 138 EVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXX-NKLIRVGKTEPVVV 314
++ D+ + V+SIAE GA++ + ++EG+ K + +G+ +
Sbjct: 319 QIGDIKVGKVKSIAEYGAFIEVT--KDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKI 376
Query: 315 IRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHV 440
+ +DKE+ I LS + E+Y + + LR++
Sbjct: 377 LDIDKERHRISLSLKLCKPNPWEVLAEKYQVGTVIRAPLRNI 418
>UniRef50_Q4P4Z0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 316
Score = 33.1 bits (72), Expect = 5.3
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = +3
Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
K + VGK+ V V R+ +G ++L R+ IY C YA + + +
Sbjct: 30 KSVSVGKSGQVKVDRLSSFEGDVELGNRKGKLITIYDCAITYAWSGTSDDGTEASGTITF 89
Query: 456 YETSEQLEELYKKTAWYFEXKYXKKASA 539
E S ++E+ + + FE + K SA
Sbjct: 90 PEVSHEIED--EGDEYQFETEMSTKPSA 115
>UniRef50_O83303 Cluster: Ribosomal protein S1; n=2; Treponema|Rep:
Ribosomal protein S1 - Treponema pallidum
Length = 863
Score = 32.7 bits (71), Expect = 7.0
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 141 VEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXX-XXXXXXXNKLIRVGKTEPVVVI 317
V DVV V IA+ GA++ L IEG+ + ++++G +++
Sbjct: 578 VNDVVKGRVTKIADFGAFIELA--EGIEGLAHISEFSWVKKTSKPSDMVKIGDEVECMIL 635
Query: 318 RVDKEKGYIDLSKRRVSAEDIYKCTERY 401
D + G + L ++V+A + RY
Sbjct: 636 GYDIQAGRVSLGLKQVTANPWEEIEARY 663
>UniRef50_Q9LK47 Cluster: Similarity to 30s ribosomal protein s1;
n=5; Magnoliophyta|Rep: Similarity to 30s ribosomal
protein s1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 392
Score = 32.7 bits (71), Expect = 7.0
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 141 VEDVVMVNVRSIAEMGAYVHLLXYN---NIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVV 311
V DV V S+ + GA++HL + ++ G+ ++R G V+
Sbjct: 195 VGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVI 254
Query: 312 VIRVDKEKGYIDLSKRRVSAEDIYKCTER 398
V +DKEK I LS +++ + + + ++
Sbjct: 255 VTNIDKEKSRITLSIKQLEDDPLLETLDK 283
>UniRef50_Q08FY0 Cluster: EIF2a-like PKR inhibitor; n=9;
Poxviridae|Rep: EIF2a-like PKR inhibitor - Deerpox virus
W-848-83
Length = 89
Score = 32.3 bits (70), Expect = 9.3
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 132 YPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVV 311
+PE++++ + + YV L+ Y ++G + VGK V
Sbjct: 13 FPEIDELTK-GIVILKNGELYVKLIDYG-LDGFIVDYWNVNQERFEKIRKKLVGKVIKVK 70
Query: 312 VIRVDKEKGYIDLSK 356
VIR DK KGYID+ K
Sbjct: 71 VIRTDKVKGYIDVRK 85
>UniRef50_Q4J3W5 Cluster: GGDEF; n=1; Azotobacter vinelandii
AvOP|Rep: GGDEF - Azotobacter vinelandii AvOP
Length = 530
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 453 HYETSEQLEELYKKTAWYFEXKYXKKA 533
H++T E LE++ + AWYFE K+A
Sbjct: 332 HWDTEEALEQVRRVHAWYFEADQLKRA 358
>UniRef50_A7FQJ6 Cluster: RNA-binding protein; n=4; Clostridium
botulinum|Rep: RNA-binding protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 718
Score = 32.3 bits (70), Expect = 9.3
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +3
Query: 150 VVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVDK 329
V+M VR++A+ GA+V + + +G+ +++VG V ++ VDK
Sbjct: 650 VLMGTVRNVADFGAFVDIGVHQ--DGLVHISQLSDRFVKHPLDIVKVGDIVEVRILEVDK 707
Query: 330 EKGYIDLSKRR 362
++ I LS ++
Sbjct: 708 KRNRISLSMKK 718
>UniRef50_A3ZTD7 Cluster: 30S ribosomal protein S1; n=2;
Bacteria|Rep: 30S ribosomal protein S1 - Blastopirellula
marina DSM 3645
Length = 536
Score = 32.3 bits (70), Expect = 9.3
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 150 VVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGKTEPVVVIRVDK 329
++ V I + GA+V + IEG+ +++ G+ V V+ +DK
Sbjct: 416 IINGKVTKIMDFGAFVEIAP--GIEGLVHVSEVSHTRVSRIESVLKAGEKVEVKVVNIDK 473
Query: 330 EKGYIDLSKRRVS 368
EK I LS + +S
Sbjct: 474 EKRRIGLSIKALS 486
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,991,427
Number of Sequences: 1657284
Number of extensions: 8991679
Number of successful extensions: 22720
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 22117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22706
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -