Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H04
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0677 + 10343089-10343604,10344316-10344462,10344539-103446...   150   1e-36
07_03_1773 - 29422660-29422806,29423103-29423201,29423811-294239...   146   9e-36
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780...    28   6.7  

>03_02_0677 +
           10343089-10343604,10344316-10344462,10344539-10344643,
           10345411-10345509,10345662-10345814
          Length = 339

 Score =  150 bits (363), Expect = 1e-36
 Identities = 79/170 (46%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
 Frame = +3

Query: 99  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXN 275
           MP L CR Y+ ++PEV+  VM+ V+ IA+MGAYV LL YNNIEGM              +
Sbjct: 1   MPNLECRMYEPRFPEVDAAVMIQVKHIADMGAYVSLLEYNNIEGMILFSELSRRRIRSIS 60

Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
            LI+VG+ EP +V+RVD++KGYIDLSKRRVS E+ + C +RY K+K V+SI+RHVA  L 
Sbjct: 61  SLIKVGRQEPAIVLRVDRDKGYIDLSKRRVSEEEAHACEDRYNKSKLVHSIMRHVAETLG 120

Query: 456 YETSEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDP-SVLDECGLHE 602
            +    LE LY++  W     Y K   A++ FK    DP ++LD     E
Sbjct: 121 ID----LEPLYQRIGW---PLYRKYGHAFEAFKLIVADPDAILDSLTYEE 163


>07_03_1773 -
           29422660-29422806,29423103-29423201,29423811-29423915,
           29423990-29424136,29424436-29424954
          Length = 338

 Score =  146 bits (355), Expect = 9e-36
 Identities = 80/165 (48%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
 Frame = +3

Query: 99  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXN 275
           MP L CR Y+  +PEVE  VM+ V+ +AE+GAYV LL YNNIEGM               
Sbjct: 1   MPNLECRMYEAPFPEVETAVMIQVKHLAELGAYVSLLEYNNIEGMILYSELSRRRIRSIP 60

Query: 276 KLIRVGKTEPVVVIRVDKEKGYIDLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLH 455
            LI+VG+ EP VV+RVD +KGYIDLSKRRVS  D   C +RY+K+K V+SI+RH+A  LH
Sbjct: 61  SLIKVGRQEPAVVLRVDHDKGYIDLSKRRVSHHDRRTCEDRYSKSKFVHSIMRHLAETLH 120

Query: 456 YETSEQLEELYKKTAWYFEXKYXKKASAYDFFKQAAVDP--SVLD 584
            +    LE LY + AW     Y     A+D FK    DP  ++LD
Sbjct: 121 LD----LEPLYHRIAW---PLYRTYGHAFDAFKLIVADPDAAILD 158


>06_03_0237 +
           18576317-18576412,18577273-18577778,18577906-18578024,
           18578409-18578763,18578803-18578866,18578967-18579231,
           18579354-18579529
          Length = 526

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -3

Query: 572 WVYSCLFEEVICRGFLXIFLFKVPSCFFIK 483
           W ++C+F   + R F+ + L K+P+ + +K
Sbjct: 465 WEHTCMFCTHMLRAFVHVQLEKIPAAYILK 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,955
Number of Sequences: 37544
Number of extensions: 243442
Number of successful extensions: 564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)