Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H04
(610 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 26 0.25
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.1
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 22 4.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.4
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 21 9.4
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 26.2 bits (55), Expect = 0.25
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 323 HSDNDNRFSLSHSDQFVNG-SDTSSGKLR*QD 231
H+D N SL+H DQ G + T SGK R Q+
Sbjct: 795 HTDIGNSQSLAHQDQCCPGFTMTKSGKTRHQN 826
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 390 CTCIYLQQIHDVSISLCILFLCP 322
C CIY+Q I+ +LCP
Sbjct: 183 CKCIYVQSINLCMAGRLFGYLCP 205
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 3.1
Identities = 14/71 (19%), Positives = 32/71 (45%)
Frame = +3
Query: 345 DLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAXLLHYETSEQLEELYKKTAWYFEXKYX 524
D+ + ++ I + TE K ++S++ LHYET + ++ W + +
Sbjct: 678 DICQLLKDSQYIREQTESDDKEGYLHSVVSGALDRLHYETDPCVRYYPRRKEWLYLHR-A 736
Query: 525 KKASAYDFFKQ 557
+ S ++ + Q
Sbjct: 737 RSESEFEMYHQ 747
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 22.2 bits (45), Expect = 4.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 43 MMKQVNVVHVDGNF 2
MMK+ NVV +GNF
Sbjct: 66 MMKKFNVVDENGNF 79
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 350 IETSCIC*RYIQVH-RTLRKSKSSKLD 427
I SCIC R+I H + L S K D
Sbjct: 484 IHKSCICVRFIAEHTKMLEDSTKVKED 510
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 5.4
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 350 IETSCIC*RYIQVH-RTLRKSKSSKLD 427
I SCIC R+I H + L S K D
Sbjct: 484 IHKSCICVRFIAEHTKMLEDSTKVKED 510
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 539 CRGFLXIFLFKVPSCFF 489
C+G L IF F P C F
Sbjct: 186 CQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 539 CRGFLXIFLFKVPSCFF 489
C+G L IF F P C F
Sbjct: 186 CQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 539 CRGFLXIFLFKVPSCFF 489
C+G L IF F P C F
Sbjct: 237 CQGRLNIFPFDDPLCSF 253
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -3
Query: 539 CRGFLXIFLFKVPSCFF 489
C+G L IF F P C F
Sbjct: 186 CQGRLNIFPFDDPLCSF 202
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 339 YIDLSKRRVSAEDIYKCTERYAKAKAVNSIL 431
+ ++ RR E +YK E + + +A SIL
Sbjct: 318 HAEVVARRCLCEYLYKQLELHTEDRAAESIL 348
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 354 KRRVSAEDIYKCTERYAKAK 413
KR AE YK +R+AK +
Sbjct: 140 KRSKKAEAKYKARQRFAKVE 159
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,727
Number of Sequences: 438
Number of extensions: 2493
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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