Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H03
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.77
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 1.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 1.8
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.3
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 3.1
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 3.1
SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing] |Schizos... 26 4.1
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 4.1
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 5.4
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 5.4
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 7.2
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 25 7.2
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 7.2
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 7.2
SPBC16E9.05 |erg6||delta-sterol C-methyltransferase |Schizosacch... 25 9.5
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 9.5
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 9.5
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 9.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 9.5
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.5
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.7 bits (61), Expect = 0.77
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 321 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESHK 491
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ + S +
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 492 L 494
L
Sbjct: 112 L 112
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEE-----KISRNL 185
Query: 519 XETNEKLAP 545
++ ++P
Sbjct: 186 RSSSRSISP 194
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 1.8
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Frame = +3
Query: 324 GDANGKAKEAL----EQSRQNIERTAEELRKAHPDVE---KNATALREKLQAAVQNTVQE 482
G+ N A+ AL E S +N+E K+ + TA ++ + V QE
Sbjct: 333 GNVNLSARRALFEKKESSTKNVENPVSHHLKSPVRTSFPPASTTASKQDSPSTVPVDKQE 392
Query: 483 SHKLAXK-VSSNVXETNEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPT 623
+ K K VSSN E+ + A FAK + + + P P T
Sbjct: 393 TAKPINKQVSSNETSAQEEPRESVAALRARFAKANVSENNDPPTFPKT 440
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 2.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 446
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 392 LGRALDVLPRLFQSLLGLAVRVSERCPGDSW 300
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 3.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEE 395
S A G NG+AKE E+ R ++T E+
Sbjct: 468 SSAKQGKGNGRAKETPEEKRARKKKTKED 496
>SPAP7G5.02c |gua2||GMP synthase [glutamine-hydrolyzing]
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/79 (24%), Positives = 31/79 (39%)
Frame = -1
Query: 342 PCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDLVSELNCCC*SLMELPWCGV 163
PC ++ ALP++ + LS + A F+L + C + E+ W
Sbjct: 49 PCTQKIEALPFKPIGVILSGGPYSVYDDIAPHVDP-AVFELGVPVLGICYGMQEIAWLNG 107
Query: 162 RCP*RSRERRVAPSLLGPE 106
RC ER P+ + E
Sbjct: 108 RCVEPGIEREYGPATVSME 126
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEK 425
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 369 ASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 247
AST+ K PWP + L +P + + CS+ +E ++ +
Sbjct: 38 ASTLEKEPWPASTALLVMPG---GRDMGYCSSFNETIYRKI 75
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE-S 485
+RAA +AN + E E ++ IE R+A ++ E+ + Q +E S
Sbjct: 798 ARAAEEEANRELHEQEEAQKRAIEERTRAAREAKEREQREMAEKLERQRRIQQERDEEIS 857
Query: 486 HKLAXKVSS 512
KLA K ++
Sbjct: 858 RKLAEKAAA 866
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 396 LRKAHPDVEKNATALREKLQAAVQNTVQE 482
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 345 KEALEQSRQNIERTAEELRKAHPD--VEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
++ L + R NI ++ + K+ D + N L+ A+ + V+E + ++
Sbjct: 53 QKRLAKLRANIHLESQVIGKSRIDRMLATNVEKLQTVSHASTLHDVEEFYTSHSAKPLDI 112
Query: 519 XETNEKLAPKIXAAY 563
E NE+L+ + +AY
Sbjct: 113 SEINERLSEAVQSAY 127
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 333 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 428
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 375 CSASTVPKPPWPCRSRLRALPWRLLAK 295
C +T+PKPP+ + L LP + A+
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKSTAQ 316
>SPBC16E9.05 |erg6||delta-sterol C-methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 517 TFEDTXFANLWDSCTVFCTAACS--FSRRAVAFFSTSGWALRSSSAV 383
T + T N+WD TVF T+ +R +V F G A + +S V
Sbjct: 297 TGDITKCQNIWDVFTVFRTSRLGKLVTRYSVQFLEKIGVAAKGTSKV 343
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +3
Query: 321 LGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 461
L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 525 LTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 448 FSRRAVAFFSTSGWALRSSSAVRSMF 371
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 9.5
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = +3
Query: 339 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESHKL 494
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E KL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 495 AXKVSSNVXETNEKLAPKI 551
+ T +KL KI
Sbjct: 187 YKDMEQENASTIQKLTSKI 205
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEE 395
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
KA + LE+ ++ E + EE+ H + T+ + + + +QE +V +
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEK----SRVDKMI 408
Query: 519 XETNEKLA 542
E +KL+
Sbjct: 409 DEYRQKLS 416
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,884,389
Number of Sequences: 5004
Number of extensions: 29831
Number of successful extensions: 141
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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