Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H03
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 36 0.038
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.81
SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011) 31 1.1
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 30 1.4
SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 30 1.9
SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5) 29 2.5
SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 2.5
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 29 2.5
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.5
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 2.5
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 29 2.5
SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083) 29 3.3
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 29 4.3
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 28 5.7
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 28 5.7
SB_51039| Best HMM Match : OAR (HMM E-Value=0.92) 28 7.6
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 7.6
SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7) 28 7.6
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.6
SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT--VQESHKLAXKVSS 512
KAKEAL + + ++ T E+L+ AH + + L+ K +N + +L K+
Sbjct: 1829 KAKEALSKENKELKGTVEQLQDAHEKLSEENRLLKRKENEQSENVDDFESGEELQLKI-K 1887
Query: 513 NVXETNEKLAPKIXAA 560
+ E NE L+ ++ A
Sbjct: 1888 ELNEKNESLSSQLREA 1903
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +3
Query: 321 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAX 500
L + N K K+ALE+ R+ ++ +E ++ D+E+ L ++ + +E+ +L
Sbjct: 1961 LAEQNEKLKDALEELREAVQHLWDEKKEKERDIEQ----LNSQISSGDVQGYEETEELKA 2016
Query: 501 KVSSNVXETNEKL 539
++ S + + N KL
Sbjct: 2017 QL-SQLRDQNNKL 2028
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEELRK--AHPDV-EKNATALREKLQAAVQNTVQ 479
+ A D K ++A E+ +Q R E+ +K A+ + EK+ LREK+Q+ + ++
Sbjct: 1601 AEATTSDLQTKLRKAKEKIKQGSARQEEQTKKYKAYQEKREKDVAELREKVQSLEKELME 1660
Query: 480 ESHKLAXKVSSNVXETNEKLAPKIXA 557
S KL + + + E+L K+ A
Sbjct: 1661 TSEKLREDLRGS-EKREEELKLKLEA 1685
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 333 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 482
N + EAL+ + + +E+ + +K+ TAL+E+L + VQ +E
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEE 691
>SB_44862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 399 GAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQA 250
G PC+RC + P P R + WR LA ALS +T + A
Sbjct: 95 GQNNPCSRCGLLSCPTTTSP-EKRRKTPSWRTLAPALSPSATQPAACYDA 143
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/98 (22%), Positives = 43/98 (43%)
Frame = +3
Query: 348 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXET 527
+AL++ +N + A K ++ E A+++ Q + + A +S V
Sbjct: 337 DALQEKEENEPQIAPLSDVKDALTGKEGVSIPESTDASLKQKEQLA-ETATSTNSKVEVD 395
Query: 528 NEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPTPSSEPS 641
++ + KI + K+T D ++ P TP SEP+
Sbjct: 396 IQEGSTKIIPLSEETVKSTVTQDSKEDSEPVTPDSEPA 433
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK--VSSNVXET 527
L Q R+N E + L+ +EK +LR++L V Q + +L K + +V E
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDKQTMLESVHER 162
Query: 528 NEKLAPKI 551
N L ++
Sbjct: 163 NSDLERRL 170
>SB_43708| Best HMM Match : TPR_2 (HMM E-Value=0.011)
Length = 270
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 306 VSRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT---V 476
V+ ALGD + EAL + + T E LR H + ALR+ + A++NT +
Sbjct: 5 VTHEALGDTH----EALRDTHDALRDTHEALRDTHEALRDTHEALRD-IHEALRNTHEPL 59
Query: 477 QESHKLAXKVSSNVXETNEKL 539
+++H+ + +T+E L
Sbjct: 60 RDTHEALRYTHEALRDTHEAL 80
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +3
Query: 348 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA--VQNTVQESHKLAXKVSSNVX 521
EAL + + + T E LR H + ALR+ +A + ++++H+ +
Sbjct: 148 EALRDTHEALRDTHEALRDTHEALRDTHEALRDIHEALRDIHEALRDTHEALRDTHEALR 207
Query: 522 ETNEKLAPKIXAAYD 566
+T+E L A D
Sbjct: 208 DTHEALGDTHKALRD 222
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 342 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVX 521
++E+ + ++ IE E++ +ATA +E+L++AV+ + KL K+S+
Sbjct: 936 SRESESKLQERIESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKVKISA--L 993
Query: 522 ETNEKLAPKIXAAYD 566
ET K A Y+
Sbjct: 994 ETKLKKAVNETKRYE 1008
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/78 (19%), Positives = 36/78 (46%)
Frame = +3
Query: 369 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNEKLAPK 548
Q+++ EL++ + ++++ +K + V+ + E+ KL S + NE+ +
Sbjct: 1255 QSLQTRISELQRENENLKQTIQETSDKNERRVEELISENSKLRENTSLEEKDNNEEEVQQ 1314
Query: 549 IXAAYDXFAKNTXAGDQE 602
+ YD K ++E
Sbjct: 1315 LREWYDVICKEKEQLERE 1332
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 333 NGKAKEAL---EQSRQNIERTAEELRKAHPDVEK 425
NGKA E + E+ IE E++RKA+ ++EK
Sbjct: 1930 NGKATEMVKKNEEKNNEIEEMREKMRKANEEIEK 1963
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = +3
Query: 309 SRAALGDAN---GKAKEALEQSRQNIERTAEELRKA---HPDVEKNATALREKLQAAVQN 470
+R AL D N KE +E+ + EE KA + + T K+++ Q
Sbjct: 106 TREALEDINENLASLKENIEEEESGFKAVEEEFNKATEAYNNQNIQYTRQHSKIESLKQE 165
Query: 471 TVQESHKLAXKVSSNVXETNEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPTPSSEPSILN 650
S++L + ETN++ + A D A GD + ++ SILN
Sbjct: 166 LAFRSNQLDDLIKQ--IETNKEQLKQASAELDTTASTLTEGDDKLYNLMKQKETDESILN 223
>SB_17610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 387 PCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALL 244
P +RC + P P + R + L WR LA ALS +T + A L
Sbjct: 54 PWSRCGLLSCPTTTSPAKRR-KTLSWRTLAPALSPSATQPDACCDAAL 100
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +3
Query: 351 ALEQSRQNIERTAEELR-KAHPDVEKNATA------LREKLQAAVQNTVQESHKLAXKVS 509
A+ ++ QNIER EEL K E+++T + +KLQ A ++ VQE ++
Sbjct: 280 AVNETAQNIEREREELELKLRGSEEEDSTVQGMIKIIEDKLQ-ATESMVQEQSGERERLE 338
Query: 510 SNVXETNEKLA 542
++ E E+L+
Sbjct: 339 GHLAEITEELS 349
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 315 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 470
A + + K K ++ + + E+ AEE +KA D + L+EKL AA+++
Sbjct: 342 AEITEELSKEKAGNKELKNSEEQKAEEEKKAKRDANDHVNQLQEKLGAAMRD 393
>SB_43863| Best HMM Match : FLO_LFY (HMM E-Value=1.5)
Length = 592
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 195 SNNSLTRSPSQRTHRTSARLGRTAXXXX-XXXXXXXXRVSRAALGDANGKAKEALEQSRQ 371
S+ + + S +T TS R+ +T S G++ GK K ++ ++
Sbjct: 345 SSTKSSGNSSSKTQSTSNRVVKTTGSTTPIAKADTTGSESEGKRGESVGKTKSK-DKDKE 403
Query: 372 NIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNEK 536
+ E+ E +K D++KN++ +EK + + +E + S +T EK
Sbjct: 404 SREKDKE--KKEERDLDKNSSERKEKHERDKEAKTKERSISKERDKSKGEKTKEK 456
>SB_31911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1312
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 312 RAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ---AAVQNTVQE 482
++AL D N K +EA EQS ++ EL+ +E+ + R+KLQ A + ++E
Sbjct: 902 QSALNDLNVKKEEA-EQSSRSAADVISELQAHKQVLEQEILSNRKKLQMEAVAAKQALEE 960
Query: 483 SHKLAXKVSSNVXETNEKL 539
+ ++ S + + +K+
Sbjct: 961 TKLNQIRIMSELEKEKKKM 979
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 38 SSALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIR 190
S + S S +H + RS R P+ + RRSR Q R+P + S R
Sbjct: 214 SRSRSRSRSHRKSRKRSESRSRSRSPKKSRSARRSRSPQKSRSPQRSRSPR 264
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 35 ISSALSLSTAHHGRQVRSSLRLHRSGPRSDGAT--RRSRLLQGHRTPHQGSSI 187
I ++LS+ST+ +SSL H S T +SR+ HR P +G+ I
Sbjct: 1934 IDNSLSVSTSRSPAMHKSSLHNHHSSATKPKLTIPTKSRVKSYHRPPSKGTQI 1986
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEE----------LRKAHPDVEKNATALREKLQAAVQNTVQESH 488
K +E +Q +NIE+ EE L+KA VE T L + LQ QN V
Sbjct: 954 KVEEEGKQKDKNIEQLNEELQQQDEAIAKLQKAKKQVEDERTELEDHLQEE-QNKVSHLT 1012
Query: 489 KLAXKVSSNVXETNEKL 539
K K+ S + E N L
Sbjct: 1013 KTKLKLESTLDEVNLNL 1029
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKV 506
D K + +E+ +Q+ +E VE+N +EK AVQN + E ++A
Sbjct: 552 DKQEKENKQVEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMAAAE 611
Query: 507 SSNVXETNEK 536
N+K
Sbjct: 612 ERKKEIENKK 621
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNE 533
L++ IE+ ++L A EKN L E +A+QNT+Q + + E
Sbjct: 253 LQEYTDEIEKLKKDLFAAR---EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 534 KLAPKIXA 557
A KI A
Sbjct: 310 DFAAKIEA 317
>SB_45456| Best HMM Match : DUF963 (HMM E-Value=0.00083)
Length = 337
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 399 GAPRPCARCSASTVPKPPWPCR-----SRLRALPWRLLAKALSCCSTDSEPS 259
G P P C +P PP C+ S L A + + +L C +D PS
Sbjct: 123 GIPSPLVACKFDDIPSPPVACKFDDIPSTLVACEFDGIPSSLVTCESDGIPS 174
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -1
Query: 399 GAPRPCARCSASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCASFDL 220
G P P + +P PP C+S +P L+A C D PS L +C S +
Sbjct: 183 GIPSPLVAYGSDGIPSPPVACKS--DGIPSTLVA-----CKFDGIPS---SLVACKSDGI 232
Query: 219 VSELNCC 199
S L C
Sbjct: 233 TSSLAAC 239
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 339 KAKEALEQSRQN-IERTAEE---LRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKV 506
+A++ALE++ IE EE LR DV + A EKL Q TVQ+ + +
Sbjct: 704 QARQALEETMHTTIEELHEEVETLRSRLQDVGQ-AKLEAEKLVQDTQATVQQQSEEVRSL 762
Query: 507 SSNVXETNEKLA 542
SS++ N +LA
Sbjct: 763 SSDIDRLNLQLA 774
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT---VQESHKLAXKVSSNVXE 524
+ ++++ ++ T +++++ +V++ T + E + VQ T VQE+ K + + V E
Sbjct: 1293 VNETKKEVQETKKDVQETKKEVDETKTKVDET-KKEVQETKKDVQETKKEVQETKTKVDE 1351
Query: 525 TNEKL 539
TN+++
Sbjct: 1352 TNKEV 1356
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +3
Query: 375 IERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNEKLAPKIX 554
+E+T+E K++ ++ L +LQA + + K +S + N K PK
Sbjct: 1066 LEQTSESECKSYQMYKETIEMLNMRLQALLYMRLFRLCKDGMLKTSKILMENYKAVPKSA 1125
Query: 555 AAYDXFAKNTXAGDQEDPGRPPTPSSEPSI 644
A ++ +T PTPS SI
Sbjct: 1126 QAPSPYSSSTTKMTGTPSPMSPTPSPSGSI 1155
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +3
Query: 339 KAKEALEQSRQN-------IERTAEELRKAHPDVEKNATALREKLQAA 461
+AK LEQ+R+ +E T LRK +EK T +K QAA
Sbjct: 618 EAKRELEQTREKCAHYKNGLEETEAMLRKLEAHIEKEITTWEQKYQAA 665
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVE---KNATALREKLQAAVQNTVQ 479
+++ DA AK E +Q IER E+LRKA + ++ AL+ K+ A Q
Sbjct: 1019 AKSGSSDALAAAKAREENLKQQIERLNEDLRKAKEEFTPEMRHFDALQSKIAAMELRFTQ 1078
Query: 480 ESHKL 494
L
Sbjct: 1079 REEDL 1083
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 303 RVSRAALGDANGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALREKLQAAVQNTV 476
RV G GK KE +Q + +L K A D+EK L EK+ A + V
Sbjct: 287 RVKGVLTGACRGKEKEIQDQELGTKDERDYQLEKRASDDLEKRLKKLEEKIDALFKGGV 345
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 378 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 482
+RT EE+R+ D+++ +RE + + +N Q+
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQ 206
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +3
Query: 342 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVX 521
A++ + ++ ER AEE R+ + E+ A R++ + A SH+ + S
Sbjct: 434 AEDEARRQQEEAEREAEEARRQQEEAEREAEEARQQQEDAEDEYETVSHEPVSEEPSAPQ 493
Query: 522 ETNEKL 539
E +L
Sbjct: 494 EIIRRL 499
>SB_51039| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 545
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ-AAVQNTVQESHKLAXKVSSN 515
K + +E+ + E T + R +++K A+ R K Q A + ++ ++A +
Sbjct: 34 KIAQVIERRKARREETKGKSR-TRTEIKKAASKKRRKEQRATAREELERKRQIAREKGKG 92
Query: 516 VXETNEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPTPSSEPSIL 647
T EK+ + D+ P TP + +L
Sbjct: 93 RTRTGEKILQNTGERFKNRTSKKRVTDKVKDKLPQTPEKKAEVL 136
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 369 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLA 497
++I+ EL K + D+E+ T LRE L++ V++ + +LA
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA 1449
>SB_17957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +2
Query: 14 CVAVXVR-ISSALSLSTAHHG------RQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPH 172
CVA R SS+L+LS H G R R ++ + +G SDG RR + H
Sbjct: 660 CVASFGRKASSSLALSEDHKGEVAYVIRNFRGAV-IRNTGNSSDGKQRRVEQVNPHVKVM 718
Query: 173 QGSSIR 190
GSS++
Sbjct: 719 DGSSVK 724
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 342 AKEALEQSRQNIERTAEE---LRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 512
AK+ L+ +++ + E LRK H D ++ L++ + +E +++ KVSS
Sbjct: 597 AKKELDSAKKESAARSNEVNLLRKKHEDEKRRLIGLKDGGDKELNRLKEELTQVSKKVSS 656
Query: 513 NVXETNE 533
V E ++
Sbjct: 657 AVSEMSD 663
>SB_2197| Best HMM Match : Uso1_p115_C (HMM E-Value=7)
Length = 272
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = -2
Query: 194 KVLWNCLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELGGHDVLSRD 51
K++ + + +FD +E+ + ++ + ++ + E E+GG + L RD
Sbjct: 115 KIIADQVRTIFDETKEINASSNKPTATTENTSNESEQEVGGSNALPRD 162
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Frame = +3
Query: 345 KEALEQSRQNIERTAEELRKAHPDVEKNATALR------EKLQAAVQNTVQESHKLAXKV 506
KE ++ ++Q E+ A ++ + + E + ++ + + V+E+ L +
Sbjct: 4567 KEEVDTTKQFAEQAANQMNEQQQEYEDQLRKMEMLYGELQRSEDTIHQLVEENEHLRTVL 4626
Query: 507 SSN---VXETNEKLAPKIXAAY-DXFAKNTXAGDQEDPGRPPTPSSE 635
S+ V E E Y D A D+EDP P PS +
Sbjct: 4627 DSHEDTVSEEGEASTSSEEVHYHDESPAKEEASDEEDPHIKPVPSDK 4673
>SB_16223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Frame = +3
Query: 321 LGDANGKAKEALEQSRQNIERTAEEL-----RKAHPDVEKNATALREKLQAAVQNTVQES 485
+GD GK+ + E+ ++R AEE R+A +++K A EK AV +
Sbjct: 377 VGDLVGKSMKQTEERVNEVKRRAEEAVSEVKRQAVVELQKAVRAAEEKANEAVAGAHAKM 436
Query: 486 HKLAXKVSSN-VXETN 530
K + + ETN
Sbjct: 437 EKAVLEARRQAIEETN 452
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,402,685
Number of Sequences: 59808
Number of extensions: 268722
Number of successful extensions: 1178
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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