Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_H03
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 35 0.058
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 35 0.058
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.058
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.058
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 32 0.31
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 32 0.31
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 32 0.41
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 32 0.41
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 32 0.41
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 32 0.41
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 31 0.94
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 30 1.2
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 30 1.2
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 2.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 29 2.9
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 29 2.9
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 29 3.8
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 29 3.8
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.8
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 3.8
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 3.8
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 29 3.8
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 3.8
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 3.8
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 3.8
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 28 5.0
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 28 5.0
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 28 5.0
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 28 5.0
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 28 5.0
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 28 5.0
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 28 5.0
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 28 5.0
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 5.0
AF038608-3|AAC25816.1| 106|Caenorhabditis elegans Hypothetical ... 28 5.0
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 28 6.6
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 519 XETNEKLA 542
ET K++
Sbjct: 2604 EETRAKIS 2611
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 519 XETNEKLA 542
ET K++
Sbjct: 2604 EETRAKIS 2611
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 358 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 417
Query: 519 XETNEKLA 542
ET K++
Sbjct: 418 EETRAKIS 425
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 519 XETNEKLA 542
ET K++
Sbjct: 2604 EETRAKIS 2611
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K E L++ + + +E+LRK V+ + ++ VQE KL ++ +N+
Sbjct: 2544 KETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSIDEKVQEVEKLKAEIDANI 2603
Query: 519 XETNEKLA 542
ET K++
Sbjct: 2604 EETRAKIS 2611
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ--NTVQESHK 491
+G A E +Q N+ + ++ K H DV+ ++ALR L A Q +T++++++
Sbjct: 24 IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRDTIRDAYE 82
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/109 (19%), Positives = 43/109 (39%)
Frame = +3
Query: 324 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 503
G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 504 VSSNVXETNEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPTPSSEPSILN 650
E K+ I AYD + A D D + + S+ ++ N
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEK--ASDIADSFKAHSTDSKDNVEN 483
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/109 (19%), Positives = 43/109 (39%)
Frame = +3
Query: 324 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 503
G+A K EA + ++ ++ A D + + ++ EK+ ++ + + A
Sbjct: 377 GEAKDKMGEAWDHTKDKAGEAKDKASDAADDAQGKSKSMTEKIGDSISGAWESTKDTAVS 436
Query: 504 VSSNVXETNEKLAPKIXAAYDXFAKNTXAGDQEDPGRPPTPSSEPSILN 650
E K+ I AYD + A D D + + S+ ++ N
Sbjct: 437 AKDKTAEAAGKVGDSISGAYDTVKEK--ASDIADSFKAHSTDSKDNVEN 483
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 491
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 491
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 491
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 147 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 203
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVE--KNATALREKLQAAVQNTVQESHK 491
+A K Q ++++ +ELRKA + + +EKL +VQN++ E+H+
Sbjct: 387 EAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHR 443
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 30.7 bits (66), Expect = 0.94
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +3
Query: 342 AKEALEQSRQNIERTAEELRKAHPDVEKNATALRE-KLQAAVQNT-----VQESHKLAXK 503
AKEAL +QN ER EL+K ++++ +E K + A +N+ VQE+ L K
Sbjct: 178 AKEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRATGAVQEAQVLQEK 237
Query: 504 VSSNVXETNEK 536
+ + +EK
Sbjct: 238 LQQALKALDEK 248
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 498 XKVSSNVXETNEK 536
++ N E +K
Sbjct: 1759 NEL-KNAVEQGQK 1770
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 519 XETNEKL 539
E L
Sbjct: 1094 KRKEEDL 1100
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + E ++A
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 498 XKVSSNVXETNEK 536
++ N E +K
Sbjct: 1759 NEL-KNAVEQGQK 1770
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNV 518
K + LEQ +E + +++ D+EK + L+ A +N + E K V + +
Sbjct: 1035 KIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQEN-IDEITKQKHDVETTL 1093
Query: 519 XETNEKL 539
E L
Sbjct: 1094 KRKEEDL 1100
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNEKLAPKIXAAYDX 569
EE + + E + E+ A +N E+ + K SS+V A I A D
Sbjct: 708 EEREEVEREEEYEKKLIEEEDVVAGENADNEAGVASSKTSSSVVS-----AENIIQAVD- 761
Query: 570 FAKNTXAGDQEDPGRPPTP 626
A+N QEDPG P P
Sbjct: 762 IARNEKVQRQEDPGHEPHP 780
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNE 533
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + + SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 534 KL 539
K+
Sbjct: 786 KI 787
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNE 533
L+ + +E+ EEL+K+H + + L E+ Q +Q+ + + SSN+ N+
Sbjct: 728 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQ--LQDQLREEKEQSSNLLVLNQ 785
Query: 534 KL 539
K+
Sbjct: 786 KI 787
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 351 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ------AAVQNTVQESHKLAXKVSS 512
+L++ + + E+T L K +EK+ LRE+ Q A VQ ES + ++
Sbjct: 141 SLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQKQASMNAEVQKKELESQERLSVLNK 200
Query: 513 NVXETNEK 536
E NEK
Sbjct: 201 QFMEENEK 208
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 324 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 503
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q K
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 504 VSSNVXETNEKL 539
+ N+ NEKL
Sbjct: 70 DAENLKLINEKL 81
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 324 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 503
G ++G K+ ++++ + A++ +++KN TAL EKL+A + Q K
Sbjct: 15 GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ-----VKK 69
Query: 504 VSSNVXETNEKL 539
+ N+ NEKL
Sbjct: 70 DAENLKLINEKL 81
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 482
S +LG+ + + L + +Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 483 SH 488
H
Sbjct: 116 PH 117
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 87 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 149 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 160 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 309 SRAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK--NATALREKLQAAVQNTVQE 482
S +LG+ + + L + +Q++ER A+ELR ++++ + A L QN
Sbjct: 56 STGSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNNAPR 115
Query: 483 SH 488
H
Sbjct: 116 PH 117
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 87 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 145
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 149 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 207
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 390 EELRKAHPDVEKNATALREK---LQAAVQNTVQESHKLAXK---VSSNVXETNEKLAPK 548
E + + H A L E LQA VQN QE+ +L+ K V+S+ E +EK+ K
Sbjct: 160 EFISQQHERAASRAVPLAEAEKVLQATVQNIAQETEQLSNKLNNVASDEAELDEKIERK 218
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 339 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 479
K+K+ SR+N ++TAE++ ++ D K A ++ + + Q V+
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVK 140
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 327 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVQESHKLA 497
D A+E + Q + +ER EELR + + L +E L AA + ++E K
Sbjct: 20 DRADAAEEKVRQITEKLERVEEELRDTQKKMTQTGDDLDKAQEDLSAAT-SKLEEKEKTV 78
Query: 498 XKVSSNVXETNEKL 539
+ + V N ++
Sbjct: 79 QEAEAEVASLNRRM 92
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 101 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 193
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
>AF038608-3|AAC25816.1| 106|Caenorhabditis elegans Hypothetical
protein C09G12.5 protein.
Length = 106
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 330 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-HKLAXKV 506
ANG K+ +E+ + E+ E+ KA NA+ +KL A N QE HKL KV
Sbjct: 35 ANGLKKDLVEKILELREKYNTEIIKA------NASG-NQKLMQATWNKHQELYHKLFAKV 87
Query: 507 SSNVXETNEKL 539
+ E EKL
Sbjct: 88 TKEQKEIYEKL 98
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNE 533
L+Q ++ +E A++ +P +EK + R T ++SH + +SN T +
Sbjct: 434 LQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRRNKTNRKSHTSTDRTNSNNTLTRK 493
Query: 534 K 536
K
Sbjct: 494 K 494
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVXETNE 533
L+Q ++ +E A++ +P +EK + R T ++SH + +SN T +
Sbjct: 434 LQQKKKTLELDAQKPMSPNPAIEKKKSEDRRNNMDRRNKTNRKSHTSTDRTNSNNTLTRK 493
Query: 534 K 536
K
Sbjct: 494 K 494
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,907,806
Number of Sequences: 27780
Number of extensions: 187020
Number of successful extensions: 990
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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