Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_H03
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.9  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 128 HHRSLGQSDAGEENYELGGHDVL 60
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 241 LQQGLEGRLRVRAATAQRLRQESPGQRSETRTARPRR 351
           L+QG++  L +  A     R  SP + +E+    P R
Sbjct: 357 LKQGIQFHLYINTAPCGDARIFSPHEENESVDKHPNR 393


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +3

Query: 354 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-HKLAXKVSSNVXETN 530
           +EQ  QN++   +     H  ++KNA    +K    +  ++Q+S  KL  K  S   E  
Sbjct: 48  MEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDP 107

Query: 531 EKLAPKIXAAYDXF 572
            + A ++   Y  F
Sbjct: 108 CEKAYQLVKCYVEF 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,808
Number of Sequences: 438
Number of extensions: 2060
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)