Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G23
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 36 0.016
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 35 0.036
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 33 0.19
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 33 0.19
At4g27595.1 68417.m03964 protein transport protein-related low s... 31 0.58
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 31 0.77
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 29 1.8
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 1.8
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 29 1.8
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 3.1
At3g59820.1 68416.m06675 calcium-binding mitochondrial protein-r... 28 4.1
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 28 5.4
At5g40450.1 68418.m04905 expressed protein 28 5.4
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 28 5.4
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 28 5.4
At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit (... 28 5.4
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 28 5.4
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 28 5.4
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 27 7.2
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.2
At4g32260.1 68417.m04590 ATP synthase family contains Pfam profi... 27 7.2
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 27 7.2
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 27 7.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 7.2
At5g51370.1 68418.m06369 F-box family protein similar to unknown... 27 9.5
At3g50180.1 68416.m05486 hypothetical protein 27 9.5
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 27 9.5
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 27 9.5
At1g68790.1 68414.m07863 expressed protein 27 9.5
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXV 479
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++++ +
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESG 343
Query: 480 SSNVQETNEKLA 515
+ +ET + A
Sbjct: 344 AQKAEETKDSAA 355
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 35.1 bits (77), Expect = 0.036
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +3
Query: 297 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVXKNATALREKLQAAVQNTVQESQKLXK 473
G A G ++ E+ R +TA+ + KAH + QAA Q + +Q +
Sbjct: 22 GQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQSAKE 81
Query: 474 XVSSNVQETNEKLAPKIKAAYDDFAKNTQEGDQ*R 578
S Q +K +AA + K +Q GD+ R
Sbjct: 82 KTSQTAQTAQQKAHETTQAAKE---KTSQAGDKAR 113
Score = 31.5 bits (68), Expect = 0.44
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 1/89 (1%)
Frame = +3
Query: 297 GDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNA-TALREKLQAAVQNTVQESQKLXK 473
G+ GKA+E Q+ + AEE R + A E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 474 XVSSNVQETNEKLAPKIKAAYDDFAKNTQ 560
Q EK + + A + TQ
Sbjct: 71 KAHETAQSAKEKTSQTAQTAQQKAHETTQ 99
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNV 491
KA + + +IE EELR HPD N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 492 QETNEKLAPKIK 527
+ E L PK +
Sbjct: 246 EFNQEPLLPKFR 257
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNV 491
KA + + +IE EELR HPD N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 492 QETNEKLAPKIK 527
+ E L PK +
Sbjct: 246 EFNQEPLLPKFR 257
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 300 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLX 470
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 471 KXVSSNVQETNE 506
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +3
Query: 342 QNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEKLAPK 521
+++E+ +E RKAH + A AL +LQAA + Q+L + ++ET L K
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQEL---AQARLKET--ALDNK 930
Query: 522 IKAAYDDFAKNTQEGD 569
I+AA K ++ D
Sbjct: 931 IRAASSSHGKRSRFED 946
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 336 SRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSN 488
S N+ RT ++ HP+ + +RE + + ++E+ +L + V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/85 (23%), Positives = 46/85 (54%)
Frame = +3
Query: 318 KEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQE 497
+E+ E+ +N E+ A ++ + ++ + T ++EK +++ Q E+++ K S + ++
Sbjct: 365 EESKEEEPENKEKEASSSQEEN-EIKE--TEIKEKEESSSQEG-NENKETEKKSSESQRK 420
Query: 498 TNEKLAPKIKAAYDDFAKNTQEGDQ 572
N KI+ + NTQ+GD+
Sbjct: 421 ENTNSEKKIEQVESTDSSNTQKGDE 445
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEK 509
+++ + + AEEL+ D+ EKL Q E++ + K VSS+V++
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKDKFSA 125
Query: 510 LAPKIKAAY 536
++K ++
Sbjct: 126 ATEEVKESF 134
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +3
Query: 324 ALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETN 503
ALE ++ E + D+ K T+ EKLQ+ + + +E+ ++ S +E
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 504 EKLA 515
+A
Sbjct: 536 SVIA 539
>At3g59820.1 68416.m06675 calcium-binding mitochondrial
protein-related contains weak similarity to
Calcium-binding mitochondrial protein Anon-60Da
(Swiss-Prot:P91927) [Drosophila melanogaster]
Length = 755
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 276 RVSXAALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQA-AVQNTVQ 452
R ++ +A A + E+ + ++ A+ ++A P+ A ++A A +Q
Sbjct: 103 RYMSLSIRNATTVAAKKPEEEDKKVDELAKNRKEASPEECDQAVESLSSVKAKAKAKRLQ 162
Query: 453 ESQKLXKXVSSNVQETNEKLAPKIKA 530
ES+K+ + + K+ P IKA
Sbjct: 163 ESKKVARSIVQRAWAIVLKIGPAIKA 188
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = +3
Query: 291 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLX 470
A D+ GK KEA + EEL KA D+ TA +++Q +V + KL
Sbjct: 151 AANDSLGKEKEARLSVEKAQAGLTEELGKAQGDL---QTA-NQRIQ-----SVNDMYKLL 201
Query: 471 KXVSSNVQETNEKLAPKIKAAYDDFAKNTQE 563
+ +S++Q N KL + A++ + +E
Sbjct: 202 QEYNSSLQLYNSKLQGDLDEAHETIKRGEKE 232
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXV 479
D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ K V
Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880
Query: 480 SSNVQETNEK 509
++E E+
Sbjct: 881 DEKIEEKPEE 890
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 15 SALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSP 194
+A + ++A + + R+ +++ RS PR DG RRS L +R+P +++ + LT +P
Sbjct: 88 AAAASASAPYEVESRTVVKVARSEPR-DGE-RRSPLPLVYRSPSLPTTVSSSDPHLTHAP 145
Query: 195 SQRTHRTSARLGR 233
R A+ GR
Sbjct: 146 VPMEPRDGAKDGR 158
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 15 SALSLSTAHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSP 194
+A + ++A + + R+ +++ RS PR DG RRS L +R+P +++ + LT +P
Sbjct: 88 AAAASASAPYEVESRTVVKVARSEPR-DGE-RRSPLPLVYRSPSLPTTVSSSDPHLTHAP 145
Query: 195 SQRTHRTSARLGR 233
R A+ GR
Sbjct: 146 VPMEPRDGAKDGR 158
>At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit
(IRX1) nearly identical to gi:12836997
Length = 985
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 235 VLPSLAEVLCVL*LGERVKLLF*SLMELPWCGV 137
++P+L+ + +L LG + ++ S++EL W GV
Sbjct: 787 IIPTLSNLASMLFLGLFISIILTSVLELRWSGV 819
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 294 LGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQE--SQKL 467
L +NG + + + + I+ E+ ++ + RE AV+++ + + ++
Sbjct: 1722 LKKSNGVINKEMTKLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEV 1781
Query: 468 XKXVSSNVQETNEKLAPKIKAAYDDFAKNTQ 560
K V+ +++E EKL P++ + N+Q
Sbjct: 1782 MKSVAEHLRELKEKLPPEVSRCEAFESMNSQ 1812
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEELRKAHPDVXKNATALRE----KLQAAVQNTVQESQKLXKXV 479
KAKE +++R+ ++TAE++ + + AT ++ K+ + V +++ +
Sbjct: 251 KAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFL 310
Query: 480 SSNVQETNEK 509
S +ET +K
Sbjct: 311 SGKTEETKQK 320
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +3
Query: 291 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLX 470
A+G +GK +E +++ + + E++ +A + + +R E +KL
Sbjct: 306 AMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKMEEMR-----------LEGKKLD 354
Query: 471 KXVSSNVQETNEKLAPKIKAAYDDFAKNTQEG 566
+ S Q++ E A K D A+ +EG
Sbjct: 355 EDASRKTQQSTESAADKAHETKDSVAQRGEEG 386
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEK 509
++ +++ + AE K A A E ++A+ T+++ + + + T E
Sbjct: 482 QEEFKSLSKRAEVFDKLAEMKVAAALAQVEAVRASENETLKKLETTQEEIKKLKTATEEA 541
Query: 510 LAPKIKAAYDDFAKNTQEGDQ*RFREGGQ 596
L KAA D AK EG+ R+RE Q
Sbjct: 542 LK---KAAMADAAKKAVEGELRRWRERDQ 567
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 321 EALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQ--ES-QKLXKXVSSNV 491
EAL+ S Q + AE LRKA + + L +L+ A + Q ES Q+L + +S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 492 QE 497
E
Sbjct: 1057 SE 1058
>At4g32260.1 68417.m04590 ATP synthase family contains Pfam profile:
PF00430 ATP synthase B/B' CF(0); identical to cDNA
chloroplast ATP synthase beta chain precursor (atpG)
GI:5730140
Length = 219
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 288 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATA-LREKLQAAVQNTVQESQK 464
A++ D + + KE EQ+ + E+ A + K + EKL + +E ++
Sbjct: 126 ASVKDTSTEVKELDEQAAAVMRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKE 185
Query: 465 LXKXVSSNVQETNEKLAPKIKAAYDDFAK 551
+ S +ET + L +I A +D K
Sbjct: 186 ALASLESQKEETIKALDSQIAALSEDIVK 214
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +1
Query: 187 AHQVKGRTGLQQG-LEGRLRV-----RAATAQRLRQESPXQRSETRTARPR 321
A + GR Q+G LEG LRV A QRL+ P ++ T+ RPR
Sbjct: 60 ARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQVSVPLEKPATKKNRPR 110
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 288 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREK 422
AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 370 AALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = +3
Query: 315 AKEALEQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQ 494
AKE +E+ R +E + + + N TAL++ +++A +N E++K + + + +
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028
Query: 495 ETNEKLA 515
E+++
Sbjct: 1029 SLRERVS 1035
>At5g51370.1 68418.m06369 F-box family protein similar to unknown
protein (emb|CAB82288.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 355
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 261 SCCSTDSEPSFQALLKSCASFDLVSELNCC 172
SC D+ P + LL+SC + + + CC
Sbjct: 286 SCRKIDASPGPEKLLRSCPAMESLQLKRCC 315
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 12 PSALSLSTAHHGRQVRSSLRLHR 80
P +SL HHGRQ S+ H+
Sbjct: 197 PQTVSLGPYHHGRQQTQSMECHK 219
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/69 (20%), Positives = 31/69 (44%)
Frame = +3
Query: 330 EQSRQNIERTAEELRKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSNVQETNEK 509
E++ + ++ EE + D+ EKL E++ K VSS+V++
Sbjct: 66 ERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQADGVWTEAESAAKKVSSSVKDKLSA 125
Query: 510 LAPKIKAAY 536
+ ++K ++
Sbjct: 126 ASEEVKESF 134
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 312 KAKEALEQSRQNIERTAEEL-RKAHPDVXKNATALREKLQAAVQNTVQESQKLXKXVSSN 488
KA +A E+ R+ E + +KAH + +REK Q + +S+ + V +
Sbjct: 233 KAHDAKEKVREKAHDVKETVAQKAHESKERAKDRVREKAQELKETATHKSKNAWERVKNG 292
Query: 489 VQE 497
+E
Sbjct: 293 ARE 295
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 300 DANGKAKEALEQSRQNIERTAEELRKAHPDVXKNATALREK---LQAAVQNTVQESQKLX 470
+ GK E +EQ + I E+L K + K +++K L A ++ TV+E +K
Sbjct: 381 ELEGKKAE-IEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLK-TVKEKEKAL 438
Query: 471 KXVSSNVQETNEKL 512
K + NE+L
Sbjct: 439 KAEEKKLHMENERL 452
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,021,914
Number of Sequences: 28952
Number of extensions: 145943
Number of successful extensions: 633
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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