Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G21
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 174 6e-44
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 174 6e-44
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 174 6e-44
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 102 3e-22
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 100 1e-21
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 31 0.81
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 31 0.81
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 31 0.81
AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p pro... 30 2.5
AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-P... 30 2.5
AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p pro... 29 3.3
AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA ... 29 3.3
AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p pro... 29 5.7
AE014297-773|AAF54259.1| 91|Drosophila melanogaster CG8021-PA ... 29 5.7
AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA... 29 5.7
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 28 7.5
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 28 7.5
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 28 7.5
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 28 7.5
BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p pro... 28 7.5
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 28 7.5
AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p pro... 28 7.5
AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding ... 28 7.5
AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-P... 28 7.5
AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-P... 28 7.5
AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-P... 28 7.5
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 28 7.5
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 28 7.5
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 28 7.5
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 28 7.5
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 174 bits (424), Expect = 6e-44
Identities = 79/89 (88%), Positives = 84/89 (94%)
Frame = +2
Query: 272 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 451
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 452 FGVTEEETMEFFNQQMHLSGLAXAAGNPV 538
FGVTEEE MEFFNQQMHL GLA AAG+PV
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPV 130
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 174 bits (424), Expect = 6e-44
Identities = 79/89 (88%), Positives = 84/89 (94%)
Frame = +2
Query: 272 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 451
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 452 FGVTEEETMEFFNQQMHLSGLAXAAGNPV 538
FGVTEEE MEFFNQQMHL GLA AAG+PV
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPV 130
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 174 bits (424), Expect = 6e-44
Identities = 79/89 (88%), Positives = 84/89 (94%)
Frame = +2
Query: 272 LYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIP 451
LYWDVPPPGFEHITP+QYKAMQA+GQIPA++V DTPQ AVPVVGSTITRQARRLYVGNIP
Sbjct: 42 LYWDVPPPGFEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNIP 101
Query: 452 FGVTEEETMEFFNQQMHLSGLAXAAGNPV 538
FGVTEEE MEFFNQQMHL GLA AAG+PV
Sbjct: 102 FGVTEEEMMEFFNQQMHLVGLAQAAGSPV 130
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 102 bits (245), Expect = 3e-22
Identities = 46/78 (58%), Positives = 56/78 (71%)
Frame = +2
Query: 278 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFG 457
WD+PP G+ H+TP QYKAM A+GQI + I++D S ITRQARRLYVGNIPFG
Sbjct: 62 WDIPPEGYNHLTPQQYKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFG 121
Query: 458 VTEEETMEFFNQQMHLSG 511
VT+EE M+FFN Q+ G
Sbjct: 122 VTDEEMMQFFNHQIMALG 139
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 100 bits (240), Expect = 1e-21
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = +2
Query: 278 WDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPFG 457
WD+PP G+ H+TP Q+KAM A+GQI + I++D S ITRQARRLYVGNIPFG
Sbjct: 62 WDIPPEGYNHLTPQQHKAMLASGQIASRILSDGVHGGESAAISMITRQARRLYVGNIPFG 121
Query: 458 VTEEETMEFFNQQMHLSG 511
VT+EE M+FFN Q+ G
Sbjct: 122 VTDEEMMQFFNHQIMALG 139
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 404 STITRQARRLYVGNIPFGVTEEETMEFFNQ 493
S + + R ++VGNIP+ TEE+ E F++
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSE 38
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 404 STITRQARRLYVGNIPFGVTEEETMEFFNQ 493
S + + R ++VGNIP+ TEE+ E F++
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSE 38
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 31.5 bits (68), Expect = 0.81
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 404 STITRQARRLYVGNIPFGVTEEETMEFFNQ 493
S + + R ++VGNIP+ TEE+ E F++
Sbjct: 9 SIMDKSMRSVFVGNIPYEATEEKLKEIFSE 38
>AY058477-1|AAL13706.1| 529|Drosophila melanogaster GH28335p
protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 398 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGL 514
+G TI+ RL+VGNIP +E +E F++ H GL
Sbjct: 236 IGVTISFNNHRLFVGNIPKNRDRDELIEEFSK--HAPGL 272
>AE014297-2865|AAN13835.1| 529|Drosophila melanogaster CG17838-PB,
isoform B protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 398 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGL 514
+G TI+ RL+VGNIP +E +E F++ H GL
Sbjct: 236 IGVTISFNNHRLFVGNIPKNRDRDELIEEFSK--HAPGL 272
>AY061516-1|AAL29064.1| 418|Drosophila melanogaster LD46870p
protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 383 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 517
A++P + R LYVGN+P +TE E + F Q + +A
Sbjct: 218 ASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIA 262
>AE014297-14|AAF52166.2| 418|Drosophila melanogaster CG14641-PA
protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 383 AAVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLSGLA 517
A++P + R LYVGN+P +TE E + F Q + +A
Sbjct: 218 ASLPTLEPPEDRNITTLYVGNLPEEITEPELRDQFYQFGEIRSIA 262
>AY069521-1|AAL39666.2| 958|Drosophila melanogaster LD23810p
protein.
Length = 958
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 305 HITPLQYKAMQAAGQIPANIVADTPQ--AAVPVVGSTITRQAR--RLYVGNIPFGVTEEE 472
H P Q A AA +P++ V+ T Q ++ GS T LY+GN+ ++E++
Sbjct: 173 HSAPAQQPAASAA-PVPSSSVSTTSQNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQ 231
Query: 473 TMEFFNQQMHLSGL 514
ME F + L+ +
Sbjct: 232 LMEIFGRYGPLASI 245
>AE014297-773|AAF54259.1| 91|Drosophila melanogaster CG8021-PA
protein.
Length = 91
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +2
Query: 398 VGSTITRQARRLYVGNIPFGVTEEETMEFFNQQMHLS 508
+ S R + +L+VGN+P+ + +E +F++ H++
Sbjct: 1 MSSGFVRSSYKLFVGNLPWTIGSKELRTYFSKYGHVA 37
>AE013599-3105|AAF46654.1| 957|Drosophila melanogaster CG9346-PA
protein.
Length = 957
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 305 HITPLQYKAMQAAGQIPANIVADTPQ--AAVPVVGSTITRQAR--RLYVGNIPFGVTEEE 472
H P Q A AA +P++ V+ T Q ++ GS T LY+GN+ ++E++
Sbjct: 172 HSAPAQQPAASAA-PVPSSSVSTTSQNSSSSKESGSFDTGDPNTTNLYLGNLNPKISEQQ 230
Query: 473 TMEFFNQQMHLSGL 514
ME F + L+ +
Sbjct: 231 LMEIFGRYGPLASI 244
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p
protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 2 RVYVGGLPYGVRERDLERFF 21
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AY070578-1|AAL48049.1| 154|Drosophila melanogaster RE12122p
protein.
Length = 154
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 416 RQARRLYVGNIPFGVTEEETMEFFNQ 493
R + LYVGN+ F TEE+ E F++
Sbjct: 27 RDSCTLYVGNLSFYTTEEQIHELFSR 52
>AJ238969-1|CAB53185.1| 154|Drosophila melanogaster cap binding
protein 20 protein.
Length = 154
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 416 RQARRLYVGNIPFGVTEEETMEFFNQ 493
R + LYVGN+ F TEE+ E F++
Sbjct: 27 RDSCTLYVGNLSFYTTEEQIHELFSR 52
>AE014297-2442|AAF55496.1| 154|Drosophila melanogaster CG12357-PA
protein.
Length = 154
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 416 RQARRLYVGNIPFGVTEEETMEFFNQ 493
R + LYVGN+ F TEE+ E F++
Sbjct: 27 RDSCTLYVGNLSFYTTEEQIHELFSR 52
>AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-PF,
isoform F protein.
Length = 147
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-PD,
isoform D protein.
Length = 135
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 428 RLYVGNIPFGVTEEETMEFF 487
R+YVG +P+GV E + FF
Sbjct: 5 RVYVGGLPYGVRERDLERFF 24
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,170,004
Number of Sequences: 53049
Number of extensions: 516204
Number of successful extensions: 1493
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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