Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G21
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 124 4e-29
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 124 4e-29
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 124 4e-29
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 124 4e-29
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 31 0.75
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 0.99
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 30 1.3
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 28 4.0
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 9.2
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 9.2
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 27 9.2
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 124 bits (299), Expect = 4e-29
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +2
Query: 275 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPF 454
+WDVPP GFE TP++YK MQAAGQ+P V Q+AVPVVG ++T Q+RRLYVGNIPF
Sbjct: 138 FWDVPPTGFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPF 193
Query: 455 GVTEEETMEFFNQQMHLSGLAXAAGNPV 538
G EE ++FFNQQMHL GLA A GNP+
Sbjct: 194 GCNEEAMLDFFNQQMHLCGLAQAPGNPI 221
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 124 bits (299), Expect = 4e-29
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +2
Query: 275 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPF 454
+WDVPP GFE TP++YK MQAAGQ+P V Q+AVPVVG ++T Q+RRLYVGNIPF
Sbjct: 138 FWDVPPTGFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPF 193
Query: 455 GVTEEETMEFFNQQMHLSGLAXAAGNPV 538
G EE ++FFNQQMHL GLA A GNP+
Sbjct: 194 GCNEEAMLDFFNQQMHLCGLAQAPGNPI 221
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 124 bits (299), Expect = 4e-29
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +2
Query: 275 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPF 454
+WDVPP GFE TP++YK MQAAGQ+P V Q+AVPVVG ++T Q+RRLYVGNIPF
Sbjct: 113 FWDVPPTGFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPF 168
Query: 455 GVTEEETMEFFNQQMHLSGLAXAAGNPV 538
G EE ++FFNQQMHL GLA A GNP+
Sbjct: 169 GCNEEAMLDFFNQQMHLCGLAQAPGNPI 196
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 124 bits (299), Expect = 4e-29
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +2
Query: 275 YWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARRLYVGNIPF 454
+WDVPP GFE TP++YK MQAAGQ+P V Q+AVPVVG ++T Q+RRLYVGNIPF
Sbjct: 116 FWDVPPTGFETTTPMEYKNMQAAGQVPRGSV----QSAVPVVGPSVTCQSRRLYVGNIPF 171
Query: 455 GVTEEETMEFFNQQMHLSGLAXAAGNPV 538
G EE ++FFNQQMHL GLA A GNP+
Sbjct: 172 GCNEEAMLDFFNQQMHLCGLAQAPGNPI 199
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 425 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAXAAGNP 535
R +YVGN+P GV E +E FN A A P
Sbjct: 163 RTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGP 199
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 30.7 bits (66), Expect = 0.75
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 425 RRLYVGNIPFGVTEEETMEFFNQQMHLSGLAXAAGNP 535
R +YVGN+P GV E +E FN A A P
Sbjct: 163 RTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGP 199
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 30.3 bits (65), Expect = 0.99
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 431 LYVGNIPFGVTEEETMEFFNQQM 499
++VGN+PF +TE+ + FF+ Q+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQI 270
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +1
Query: 307 YHAITIQGDASGGSDSCQYCRRHTTSCRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVF 486
Y ++ D S S + ++ + S GG N+S +I +QH WR+ ++ +
Sbjct: 76 YEIASVVADLQDTSRSAHF-KKSSPSMVRGGPQLRNSSPRPLILQQHAKWRN-EESSSIS 133
Query: 487 QSTNASIGPGPXRRQPCFWLAR 552
+ + I P Q WL R
Sbjct: 134 STDSEDISLLPNENQKWEWLRR 155
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 431 LYVGNIPFGVTEEETMEFFN 490
+YVGN PF TEEE FF+
Sbjct: 7 VYVGNAPFQTTEEELGNFFS 26
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 431 LYVGNIPFGVTEEETMEFFNQQMHLSGL 514
+YVGN PF TE++ +F+Q ++S +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNV 33
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 419 QARRLYVGNIPFGVTEEETMEFFNQQMHLSGL 514
Q +YVGN+P+ TEEE +F H++ +
Sbjct: 4 QGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNV 35
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 386 AVPVVGSTITRQARRLYVGNIPFGVTEEETMEFFNQ 493
A PVVGS T +++VG +P+ +++ E+F Q
Sbjct: 23 AEPVVGSRDT-MFTKIFVGGLPYHTSDKTLHEYFEQ 57
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 425 RRLYVGNIPFGVTEEE 472
R++YVGN+PF TE+E
Sbjct: 17 RQVYVGNMPFDATEKE 32
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +2
Query: 272 LYWDVPPPGFEHITPLQYKAMQAAGQIPANI----VADTPQAAVPVVGSTITRQARRLYV 439
L W+ EH P +A + + V TP+ P V +T TR A RL
Sbjct: 619 LSWEETEEDEEHAVPTTTPLAPSAPTVRVSTQRAPVPTTPRPTAPAVQTTTTR-ASRLET 677
Query: 440 GNIPFGVTEEETME 481
+P E+E E
Sbjct: 678 TRVPVKTVEDEEEE 691
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 27.9 bits (59), Expect = 5.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 422 ARRLYVGNIPFGVTEEETMEFFN 490
A+ +YVGN+ +G T EE + F+
Sbjct: 77 AKSVYVGNVDYGATAEEIEQHFH 99
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 385 CRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGPG 516
C+ G D N KVI R + RN+ V AS GPG
Sbjct: 1099 CKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPG 1142
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 385 CRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGPG 516
C+ G D N KVI R + RN+ V AS GPG
Sbjct: 1099 CKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPG 1142
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 464 EEETMEFFNQQMHLSGLAXAAGNPVFG 544
E T++FF + L LA A NP+FG
Sbjct: 55 ETATVDFFGAILALQALASALTNPLFG 81
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 385 CRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGPG 516
C+ G D N KVI R + RN+ V AS GPG
Sbjct: 1099 CKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPG 1142
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 385 CRAGGGFDYNTSSAKVICRQHTLWRHRRRNNGVFQSTNASIGPG 516
C+ G D N KVI R + RN+ V AS GPG
Sbjct: 1099 CKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPG 1142
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 425 RRLYVGNIPFGVTEEETMEFFNQ 493
R LY+ N+P+ +T EE E F +
Sbjct: 19 RILYIKNLPYKITTEEMYEIFGK 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,925,116
Number of Sequences: 27780
Number of extensions: 243596
Number of successful extensions: 659
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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