Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G20
         (535 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Re...    34   1.8  
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031...    33   4.1  
UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2; Burkholder...    33   5.4  
UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;...    32   7.2  
UniRef50_Q1DVZ2 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q6ZPE9 Cluster: MKIAA3013 protein; n=7; Mus musculus|Rep:
           MKIAA3013 protein - Mus musculus (Mouse)
          Length = 1461

 Score = 34.3 bits (75), Expect = 1.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 208 VNSSFTT*SRV--QNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHAT 35
           V SS  T S+   +N VPH    +LS   +  +V +VA+P +   D A + R       +
Sbjct: 789 VESSANTDSKQLSENSVPHSSEDKLSSDPAVEKVETVAQPAESLVDKAPKPRTRRSRFHS 848

Query: 34  PATCW 20
           P+T W
Sbjct: 849 PSTTW 853


>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
           OJ1031_C12.31; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
          Length = 214

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 26/70 (37%), Positives = 34/70 (48%)
 Frame = -1

Query: 217 FIYVNSSFTT*SRVQNKVPHYGYARLSGRESSRRVTSVARPVQRPSDVAGRRRPSHRAHA 38
           F+ V+  F    RV++KV H   AR SG +  +R  +V RP      V  RRR    A +
Sbjct: 2   FVRVSCMFV---RVRSKVVHVSGARDSGVQWRQRRGAVGRP----GGVGARRRGGAAAAS 54

Query: 37  TPATCWGGRV 8
            PA C  G V
Sbjct: 55  GPAACGRGGV 64


>UniRef50_Q3JT18 Cluster: Flavoprotein reductase; n=2;
           Burkholderia|Rep: Flavoprotein reductase - Burkholderia
           pseudomallei (strain 1710b)
          Length = 421

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -1

Query: 121 RRVTSVARPVQRPSDVAGRRRPSHRAHATPATCWGGR 11
           RR +S  RP  RP   A RR    RA A PA C G R
Sbjct: 335 RRRSSGTRPTPRPPRDAVRRSAIRRAAARPARCTGAR 371


>UniRef50_UPI0000DD84EF Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 301

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -1

Query: 160 HYGYARLSGRESSRRVTSVARPV--QRPSDVAGRRRP-SHRAHATPATCWGG 14
           H G+ R   R  +RRV S  RP+   RP   +G+  P +HRA       WGG
Sbjct: 199 HPGHTRRCRRSEARRVHSPRRPLPSSRPEGRSGQGAPAAHRAPTWGRGGWGG 250


>UniRef50_Q1DVZ2 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 354

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 133 RESSRRVTSVARPVQRPSDVAGRRRPSHR 47
           R S RR++S   P Q+P D  GRRR  +R
Sbjct: 118 RRSGRRISSFRHPPQQPDDPLGRRRYIYR 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,499,734
Number of Sequences: 1657284
Number of extensions: 8268704
Number of successful extensions: 21958
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21949
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)