Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G19
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.8  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +2

Query: 152 HYRLIAKKCSLIAKLAXPKIFVYRILVCSYRGEANMVIEKLHGLQATSITL 304
           HY + A  C   A      I   R  VC  + E + +I+K H  Q  +  L
Sbjct: 49  HYNIFA--CDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHRNQCRACRL 97


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +2

Query: 152 HYRLIAKKCSLIAKLAXPKIFVYRILVCSYRGEANMVIEKLHGLQATSITL 304
           HY + A  C   A      I   R  VC  + E + +I+K H  Q  +  L
Sbjct: 49  HYNIFA--CDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDKTHRNQCRACRL 97


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +1

Query: 349 CYAHEKTSYRTSIPYTNPEHXKPFL 423
           CY    + YR  I    PEH  P L
Sbjct: 91  CYYTNWSQYRVKIGKFTPEHIIPDL 115


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = +1

Query: 16  ASVV*IIFNVKISNYHCQII 75
           + V+ ++F+V  S+Y+C+++
Sbjct: 223 SKVLPLLFSVSSSSYNCEVL 242


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 94  LVVFKS*LFDSDNWR 50
           + +FKS  +D D WR
Sbjct: 96  VTIFKSAFWDVDKWR 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,282
Number of Sequences: 336
Number of extensions: 2707
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)