Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G19
         (652 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g46950.1 68415.m05864 cytochrome P450 family protein similar ...    28   6.2  
At2g25200.1 68415.m03014 expressed protein                             28   6.2  

>At2g46950.1 68415.m05864 cytochrome P450 family protein similar to
           cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
           contains Pfam profile: PF00067: Cytochrome P450
          Length = 572

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 462 SGRHYVNGLDWVKHHSI 512
           +G  +VNGLDWV+H  I
Sbjct: 197 NGLIFVNGLDWVRHRRI 213


>At2g25200.1 68415.m03014 expressed protein
          Length = 354

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 307 R*IYFALYCRN*SRCYAHEKTSYRTSIPYTNPEHXKP 417
           R ++   Y  N + CY H    YR SIP+      KP
Sbjct: 72  RSLHLHFYSCNSTNCYLHSLDCYRHSIPFAFRLEIKP 108


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,288,252
Number of Sequences: 28952
Number of extensions: 227091
Number of successful extensions: 432
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)