Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G18
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.2  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 314 WPTLTKDKKKPHYLKI 361
           WP L  ++K  HYL I
Sbjct: 512 WPRLNPNEKSLHYLHI 527


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 314 WPTLTKDKKKPHYLKI 361
           WP L  ++K  HYL I
Sbjct: 512 WPRLNPNEKSLHYLHI 527


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/46 (21%), Positives = 18/46 (39%)
 Frame = -1

Query: 515 HHQSQFPSHQTKVFXPSAQDHQLHQSSGAFARNHMNYFXQXHHXHH 378
           HH SQ+  H+         +H +  + G    +H +      H H+
Sbjct: 321 HHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHY 366


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 451 WWSWAEGXKTF 483
           W SW EG K F
Sbjct: 388 WISWEEGMKVF 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,375
Number of Sequences: 438
Number of extensions: 2643
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)