Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G14
         (638 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617...    27   9.5  

>04_04_1357 +
           32860677-32860781,32861484-32861588,32861678-32861728,
           32861829-32861949,32862495-32862616,32863032-32863133,
           32863226-32863300,32863391-32863470,32863601-32863751,
           32863850-32864080,32864221-32864517,32864638-32864751,
           32864857-32865030
          Length = 575

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 421 TISSGKTLKTLNRQKKSFYYLVLSLKKNNS 332
           T+ SG+ L  ++   KS  Y+VLSLKK+ +
Sbjct: 446 TVISGEDLPAMDMNGKSDPYVVLSLKKSKT 475


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,736,432
Number of Sequences: 37544
Number of extensions: 189191
Number of successful extensions: 328
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)