Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G14
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070973-1|AAL48595.1|  349|Drosophila melanogaster RE07395p pro...    60   3e-09
AE014297-1913|AAF55108.2|  349|Drosophila melanogaster CG33332-P...    60   3e-09
AE014298-866|AAF46143.1|  301|Drosophila melanogaster CG11700-PA...    29   5.3  

>AY070973-1|AAL48595.1|  349|Drosophila melanogaster RE07395p
           protein.
          Length = 349

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = +3

Query: 60  RRPFSRDVDLQVNRFDEAQKRSIIKKAQDLNNRFSKGEAKYL 185
           RRPFSRDVDL++N+ D+ Q + I+ KA+ LN +FS+G+AKYL
Sbjct: 308 RRPFSRDVDLKLNKIDKNQTKQIVDKAKILNTKFSRGQAKYL 349


>AE014297-1913|AAF55108.2|  349|Drosophila melanogaster CG33332-PA
           protein.
          Length = 349

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = +3

Query: 60  RRPFSRDVDLQVNRFDEAQKRSIIKKAQDLNNRFSKGEAKYL 185
           RRPFSRDVDL++N+ D+ Q + I+ KA+ LN +FS+G+AKYL
Sbjct: 308 RRPFSRDVDLKLNKIDKNQTKQIVDKAKILNTKFSRGQAKYL 349


>AE014298-866|AAF46143.1|  301|Drosophila melanogaster CG11700-PA
           protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 496 TIAYYFARVDISRR*PNVHKYLFY--HTISSGKTLKTLNRQKKSFYYLVLSLK 344
           TI    A++      P  H+ L +    + +G+TL   N QK+S  YLVL L+
Sbjct: 22  TIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 74



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 496 TIAYYFARVDISRR*PNVHKYLFY--HTISSGKTLKTLNRQKKSFYYLVLSLK 344
           TI    A++      P  H+ L +    + +G+TL   N QK+S  YLVL L+
Sbjct: 98  TIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKESTIYLVLRLR 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,773,666
Number of Sequences: 53049
Number of extensions: 360040
Number of successful extensions: 696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)