Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G14
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U43282-6|AAA83617.1|  249|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF025454-9|AAK68371.1|  331|Caenorhabditis elegans Serpentine re...    28   6.5  

>Z92973-8|CAO82049.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 552 PNYIS-LHEIFDCVKTSLYILLHIILRA*IFRD 457
           PNY S LHEI D ++T   +L+H + R+ +F D
Sbjct: 109 PNYCSYLHEIEDILETREQLLIHFV-RSEVFCD 140


>Z81554-6|CAO82038.1|  517|Caenorhabditis elegans Hypothetical
           protein Y6G8.8 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 552 PNYIS-LHEIFDCVKTSLYILLHIILRA*IFRD 457
           PNY S LHEI D ++T   +L+H + R+ +F D
Sbjct: 109 PNYCSYLHEIEDILETREQLLIHFV-RSEVFCD 140


>U43282-6|AAA83617.1|  249|Caenorhabditis elegans Hypothetical
           protein T22E5.6 protein.
          Length = 249

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -1

Query: 557 VIRITFHYTKYLIV*RLRCIYYCILFCARRYFETVTKRSQI 435
           V+R+TFH    ++  ++  + Y I  C  + F  +TK+ ++
Sbjct: 99  VVRVTFHIALVILAFQIFYLAYTIGHCCSQSFTELTKKRKL 139


>AF025454-9|AAK68371.1|  331|Caenorhabditis elegans Serpentine
           receptor, class i protein61 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 548 ITFHYTKYLIV*RLRCIYYCILFCARRYFETVTKRSQIFILPHNI*W 408
           +T H    L+V  L     C++FC  R  +T+ K  + +I+P  + W
Sbjct: 88  VTPHVCMTLLVACLIYQIECMIFCFVRKHQTIAKTLRKYIMPRWVVW 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,257,364
Number of Sequences: 27780
Number of extensions: 208236
Number of successful extensions: 514
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)