Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_G13
(572 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 46 2e-05
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 43 2e-04
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 43 2e-04
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 42 3e-04
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 42 5e-04
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 40 0.001
09_04_0643 + 19176561-19176644,19176761-19176902,19178084-191781... 39 0.002
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 38 0.004
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 38 0.006
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 37 0.010
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 37 0.010
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 37 0.013
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 36 0.023
05_03_0457 + 14274533-14274879,14275575-14275605 36 0.023
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 36 0.030
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 36 0.030
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 36 0.030
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 34 0.070
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 34 0.070
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 34 0.093
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 33 0.12
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 33 0.12
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 33 0.21
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 33 0.21
03_01_0012 - 101584-101898,102274-102531,102932-103474 33 0.21
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 32 0.37
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 31 0.49
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 31 0.49
12_01_0241 - 1807379-1807418,1807579-1807625,1807800-1807892,180... 30 1.1
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 30 1.1
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 29 2.0
03_03_0084 + 14337998-14338255,14338372-14339133 29 3.5
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 29 3.5
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 28 4.6
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAW 524
K P ++G ECAG IE+VG VT+ VGD+V P W
Sbjct: 77 KEPMVIGHECAGVIEEVGSGVTHLAVGDRVALEPGISCW 115
>04_03_0562 +
17190443-17190520,17190715-17190853,17190943-17191034,
17191681-17191989,17192817-17193506
Length = 435
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
MRAV +G+GG +K ++ P P+V + EVL++V+A +N DL+ ++G R
Sbjct: 10 MRAVQYSGYGGGAAALKFVEIPVPSVKKDEVLVKVEAASINQSDLMTQKGMMR 62
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVA 503
PK PFI +GEI +VG V FKVGD+VV+
Sbjct: 66 PKFPFIPVNNVSGEIVEVGSAVREFKVGDKVVS 98
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 399 SPPKTPFILGFECAGEIEQVGENV-TNFKVGDQVVALPEYRAWAELVSVPAXYVYALPE 572
+PP G EC+G I +G NV + + VGDQV AL +AE V VPA + +PE
Sbjct: 55 APPGASPYPGLECSGTILALGPNVPSRWAVGDQVCALLSSGGYAEKVVVPAGQLLPVPE 113
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 242 MRAVVLTGFGGLKTVKILKKPE--PTVGEGEVLIRVKACGLNFQDLIVRQGRH 394
MRAVV+ GG + ++ E P GEGEVL+ V A G+N D + RQGR+
Sbjct: 1 MRAVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRY 53
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P K PFI ++ AGE+ ++G V++FKVGD+V+A+
Sbjct: 64 PNKFPFIPVYDLAGEVVELGRGVSSFKVGDKVIAI 98
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQG 388
MRAV +GG + +K ++ P PT +GEVLI+++A +N D ++G
Sbjct: 8 MRAVQYDKYGGGAQALKHVEVPIPTPKKGEVLIKMEAGSINQVDWKFQKG 57
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 378 FVRXAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVSVPAXYV 557
F A ++ + P GFE G + VG++V + KVG VAL + A++E VPA ++
Sbjct: 342 FSGGAKETAARLPLDAGFEAVGIVASVGDSVNHIKVGSP-VALMIFGAYSEFTQVPAKHL 400
Query: 558 YALP 569
+P
Sbjct: 401 LPVP 404
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
MRAV G+GG T+K ++ P P++ + E+LI+++A LN D +++G R
Sbjct: 10 MRAVQYGGYGGGAATLKFVEIPVPSLKKNEILIKIEAASLNQADWRIQKGLMR 62
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVA 503
PK PFI + +GE+ +VG + FKVGD+VV+
Sbjct: 66 PKFPFIPVTDVSGEVIEVGSAIHEFKVGDKVVS 98
>09_04_0643 +
19176561-19176644,19176761-19176902,19178084-19178172,
19178470-19179195
Length = 346
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL--PEYRAWAELVSVPAXYVYALP 569
P K PFI + +GE+ ++G V+ FK GD+VV++ P AE PA A P
Sbjct: 68 PKKFPFIPVGDLSGEVVELGGGVSGFKPGDKVVSMSFPNCGGLAEYAVAPASLTVARP 125
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
MRAV TG+GG +K ++ P P+V + EVLI+V+A +N D +++G R
Sbjct: 74 MRAVQYTGYGGGAGALKHVEIPVPSVKKHEVLIKVEAASVNPIDWSIQKGMLR 126
Score = 33.9 bits (74), Expect = 0.093
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELVS 539
PK PFI + AGEI + G V KVGD+V L + W L S
Sbjct: 130 PKFPFIPVTDVAGEIVEAGSAVHELKVGDKV--LSKLNFWPTLSS 172
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P I G E +G +E VGE VT F+VGD V+ +
Sbjct: 680 PRIFGHEASGVVESVGEGVTEFEVGDHVLTV 710
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E AG + +VG+NVT FK GD+V
Sbjct: 70 PLVPGHEIAGVVTEVGKNVTRFKAGDRV 97
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 245 RAVVLTGFGGLKTVKILKK-PEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
RAVV+ FGG + +++ + P P + G+VL+R +A +N DL +R G R
Sbjct: 31 RAVVVPRFGGPEVLEVRQGVPVPDLKPGDVLVRARAVSINPLDLRMRSGYGR 82
Score = 30.7 bits (66), Expect = 0.86
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQV 497
P P I+G + +GE+ G +V++F +G +V
Sbjct: 87 PVLPLIIGRDISGEVAATGTSVSSFTIGQEV 117
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRA 521
P ILG E AG +E VGE VT + GD V+ P Y+A
Sbjct: 66 PCILGHEAAGIVESVGEGVTEVQPGDHVI--PCYQA 99
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
MRAV G+GG + +K ++ P P+ +GEVLI+++A +N D +++G R
Sbjct: 14 MRAVQYDGYGGGAEGLKHVEVPIPSPKKGEVLIKMEAASINPIDWKIQKGMLR 66
>05_03_0457 + 14274533-14274879,14275575-14275605
Length = 125
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAELV 536
P PF+ G + AG ++ VG V F+ GD+V L ++A+L+
Sbjct: 66 PALPFVPGSDYAGFVDAVGPAVRRFRPGDRVCGLAAVGSFADLI 109
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
K P ILG E AG +E VGE V + GD VV +
Sbjct: 80 KFPRILGHEAAGVVESVGEGVEDLAPGDHVVPI 112
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 402 PPKTPFILGFECAGEIEQVGENVTNFKVGDQVVAL 506
P + PFI + AG + VG V +F VGDQVVA+
Sbjct: 68 PRRLPFIPVTDVAGVVAGVGPGVNDFAVGDQVVAM 102
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 242 MRAVVLTGFGG-LKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQGRHR 397
MRAV GG +K ++ P P+ + EVL++++A +N D +++G R
Sbjct: 12 MRAVQYDASGGGAAGLKHVEVPVPSAKKNEVLLKLEAATINPVDWKIQKGMLR 64
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 35.5 bits (78), Expect = 0.030
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
P P ILG E G +E VGENV GD VV
Sbjct: 60 PAFPRILGHEAYGVVESVGENVEGLAAGDTVV 91
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 34.3 bits (75), Expect = 0.070
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E AG + + G+NVT FK GD+V
Sbjct: 60 PLVPGHEIAGVVTEAGKNVTKFKGGDKV 87
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 34.3 bits (75), Expect = 0.070
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E G + +VG+NV FK GD+V
Sbjct: 77 PVVAGHEITGVVTEVGKNVARFKAGDEV 104
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 33.9 bits (74), Expect = 0.093
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
P P ILG E G +E VGE VT GD V+
Sbjct: 61 PVFPRILGHEAGGIVESVGEGVTELAPGDHVL 92
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E AG + +VG +V +FKVGD V
Sbjct: 64 PLVPGHEIAGVVTEVGADVKSFKVGDHV 91
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGDQV 497
P + G E G + +VG NV FKVGD+V
Sbjct: 65 PVVPGHEITGVVTKVGTNVAGFKVGDRV 92
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
P P I G E G +E VGE VT GD V+
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTELSPGDHVL 92
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 405 PKTPFILGFECAGEIEQVGENVTNFKVGDQVV 500
P P I G E G +E VGE VT+ GD V+
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTDLAPGDHVL 92
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 378 FVRXAIDSPPKTPFILGFECAGEIEQVGENVTNFKVGDQVV-ALPEYRAWAELVSVPAXY 554
+ R + S P PF+ G E G + VG +T KVGD V A ++A+ +PA
Sbjct: 91 YYRQGVYSAP-LPFVPGREAVGVVTAVGPGLTGRKVGDVVAYAGNPMGSYAQEQIIPASV 149
Query: 555 VYALP 569
LP
Sbjct: 150 AVPLP 154
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 320 EGEVLIRVKACGLNFQDLIVRQG 388
EGE+ I+ A G+NF D+ RQG
Sbjct: 73 EGEIRIKNTAIGVNFIDVYYRQG 95
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 31.9 bits (69), Expect = 0.37
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 242 MRAVVLTGFGGLKTVKILKKPEPTVGEGEVLIRVKACGLNFQDLIVRQG 388
MR V G T++ + P P GE +LI+ KACG+ DL V +G
Sbjct: 50 MRGAVFWEPGRPLTLEDFRMPRPKAGE--LLIKTKACGVCHSDLHVLKG 96
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 414 PFILGFECAGEIEQVGENVTNFKVGD 491
P + G E AG + +VG +V FKVGD
Sbjct: 64 PLVPGHEIAGVVTEVGADVKGFKVGD 89
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 31.5 bits (68), Expect = 0.49
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQV 497
K P + G E GE+ +VG VT + GD V
Sbjct: 62 KYPMVPGHEVVGEVVEVGPEVTKYSAGDVV 91
>12_01_0241 -
1807379-1807418,1807579-1807625,1807800-1807892,
1808167-1808267,1808368-1808440,1808684-1808845,
1809003-1809034,1809399-1809471,1809713-1809768,
1809871-1810105
Length = 303
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -1
Query: 533 QLGPSAVLGKSHHLIAHLKIGDIFANLLDFTSAFEAQDERS 411
++G S +LG S +A L IGD F NLL AF + +RS
Sbjct: 92 EIGDS-LLGSSGLALADLSIGDWFGNLLYSAGAFGSGKDRS 131
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 320 EGEVLIRVKACGLNFQDLIVRQGRHR 397
EGE+ I+ KA G+N+ D+ R G H+
Sbjct: 42 EGEIRIKNKAIGVNYVDIYYRTGLHQ 67
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -3
Query: 459 QLARFHQRIRSPR*KESSVESR 394
Q+ R HQR+ P+ K++SV+SR
Sbjct: 313 QVGRVHQRVEEPKVKQASVQSR 334
>03_03_0084 + 14337998-14338255,14338372-14339133
Length = 339
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 302 PEPTVGEGEVLIRVKACGLNFQDLIVRQGRHRL 400
P PT G+++ A GL+ +D++V G H +
Sbjct: 181 PPPTFNLGQLVANFAAKGLSVEDMVVLSGAHTI 213
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 408 KTPFILGFECAGEIEQVGENVTNFKVGDQV 497
K P + G E G + +VG +V F GD V
Sbjct: 60 KYPVVPGHEIVGVVAEVGSSVARFAAGDTV 89
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 28.3 bits (60), Expect = 4.6
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +1
Query: 124 RDSSTGEDPDRKWCY*NTARGNARKIYRGEKG*DPT-AQGNARRSTYRLRGSQDR*DTQK 300
+ SS P + A G +I R +K + +ARR + + +
Sbjct: 587 KSSSRAPTPQHLASFDKRANGRNEEISRKQKSTSQLMTENSARRQQMQRENNGSLLKHKN 646
Query: 301 T*ADRW*GRGPDSRESLRPKLPRFDSSSGXPSTLHRRLLSS 423
+ + R + PDS RP +P DSS ++ R L S
Sbjct: 647 STSPRVQQKKPDSERRARPPIPSPDSSKNQRQSVERSHLDS 687
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,516,692
Number of Sequences: 37544
Number of extensions: 287159
Number of successful extensions: 874
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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