Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_G13
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   4.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   5.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.1  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 366 WKFRPQAFTRIRTSPSPTVGSGFLSILTVLRPPKPVSTTAR 244
           + F+P A     T  + T  S  LS +T   P  PV TTAR
Sbjct: 798 YTFKPFASRLRATESTATESSSTLSTVTTTLP--PVVTTAR 836


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 334  DSRESLRPKLPRFDSSSGXPS 396
            D R + RPKL R  S +G P+
Sbjct: 1154 DERMTARPKLGRTPSDTGGPT 1174


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 534 PARPKRGTREEPPLDRPP*N 475
           PARP  G    P + RPP N
Sbjct: 178 PARPNPGMPPGPQMMRPPGN 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,801
Number of Sequences: 2352
Number of extensions: 9513
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)